RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 LRRC43Q8N309 656 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 MPP5Q8N3R9 675 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 PDCD7Q8N8D1 485 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 GPR152Q8TDT2 470 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 KIF9Q9HAQ2 790 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 SENP1Q9P0U3 644 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 KCNU1A8MYU2 1149 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 H7C4K7 107 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 CPP00450 1065 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 C1QAP02745 245 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 GARSP41250 739 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 SARNPP82979 210 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 QPCTQ16769 361 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 KBTBD12Q3ZCT8 623 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 MANEALQ5VSG8 457 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 RWDD4Q6NW29 188 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 RNF19BQ6ZMZ0 732 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 PRPF39Q86UA1 669 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 ARHGAP18Q8N392 663 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 MZB1Q8WU39 189 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 DEPDC1BQ8WUY9 529 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 SERPINB11Q96P15 392 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 EBNA1BP2Q99848 306 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 CRISPLD1Q9H336 500 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 SLC27A5Q9Y2P5 690 aa17.71■□□□□ 0.43
RABGGTA-201ENST00000216840 A0A1W2PPM1 405 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 FAM92AA1XBS5 289 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 GSTA2P09210 222 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 MLNP12872 115 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 HOXC13P31276 330 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 STX2P32856 288 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 PID1Q7Z2X4 250 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 SPPL2BQ8TCT7 592 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 FCRL2Q96LA5 508 aaPredicted RBP17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 TOX2Q96NM4 488 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 TTPALQ9BTX7 342 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 MLXIPLQ9NP71 852 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 NKIRAS1Q9NYS0 192 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 KLHL8Q9P2G9 620 aaPredicted RBP17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 FAM47DPA6NHR8 397 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 PRPF4O43172 522 aaKnown RBP eCLIP17.7■□□□□ 0.422e-6■□□□□ 10
RABGGTA-201ENST00000216840 SPAG7O75391 227 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 YWHAQP27348 245 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 HTR7P34969 479 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 LRRC8BQ6P9F7 803 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 UNC5AQ6ZN44 842 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 ANKS3Q6ZW76 656 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 DYDC1Q8WWB3 177 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 SLC44A1Q8WWI5 657 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 CELF6Q96J87 481 aaKnown RBP17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 BEGAINQ9BUH8 593 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 CRISPLD2Q9H0B8 497 aa17.7■□□□□ 0.42
RABGGTA-201ENST00000216840 TRDMT1O14717 391 aaKnown RBP17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 MTSS1O43312 755 aa17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 RTN3O95197 1032 aaPredicted RBP17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 HAPLN1P10915 354 aaPredicted RBP17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 SMARCB1Q12824 385 aa17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 PRSS55Q6UWB4 352 aaPredicted RBP17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 LRRC34Q8IZ02 419 aa17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 C4orf33Q8N1A6 199 aa17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 DPF3Q92784 378 aa17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 FBXO32Q969P5 355 aa17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 TBC1D31Q96DN5 1066 aa17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 SLC39A13Q96H72 371 aa17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 SMC6Q96SB8 1091 aa17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 GORASP1Q9BQQ3 440 aa17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 TLR6Q9Y2C9 796 aa17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 MAD1L1Q9Y6D9 718 aa17.69■□□□□ 0.42
RABGGTA-201ENST00000216840 UPP2O95045 317 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 APOEP02649 317 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 PRKCHP24723 683 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 SLC18A1P54219 525 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 ZBTB17Q13105 803 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 MGAT5BQ3V5L5 792 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 CPLX4Q7Z7G2 160 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 CKAP2Q8WWK9 683 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 SPATA17Q96L03 361 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 SEPT5Q99719 369 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 TRIM56Q9BRZ2 755 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 TMEM51Q9NW97 253 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 SMG5Q9UPR3 1016 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 PCDHA11Q9Y5I1 949 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 HS3ST4Q9Y661 456 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 FGF10O15520 208 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 ZBTB24O43167 697 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 EFEMP2O95967 443 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 MOCS2O96007 188 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 CD68P34810 354 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 NRG1Q02297 640 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 C14orf80Q86SX3 495 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 ARHGAP12Q8IWW6 846 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 GDAP1Q8TB36 358 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 ZSCAN18Q8TBC5 510 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 DENND1AQ8TEH3 1009 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 VWCEQ96DN2 955 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 OXCT2Q9BYC2 517 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 TBX21Q9UL17 535 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 COL4A6Q14031 1691 aa17.68■□□□□ 0.42
RABGGTA-201ENST00000216840 CXorf49A8MYA2 514 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms