RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 DEFB106AQ8N104 65 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 CADM4Q8NFZ8 388 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 C1orf216Q8TAB5 229 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 TTC17Q96AE7 1141 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 SCNM1Q9BWG6 230 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 CLSTN2Q9H4D0 955 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 DNAAF2Q9NVR5 837 aaKnown RBP22.92■■□□□ 1.26
VTI1B-201ENST00000216456 CHMP5Q9NZZ3 219 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 SERGEFQ9UGK8 458 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 DNAJC12Q9UKB3 198 aa22.92■■□□□ 1.26
VTI1B-201ENST00000216456 A0A1B0GTW7 788 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 TTC34A8MYJ7 566 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 FOXN3O00409 490 aaPredicted RBP22.91■■□□□ 1.26
VTI1B-201ENST00000216456 SART1O43290 800 aaKnown RBP22.91■■□□□ 1.26
VTI1B-201ENST00000216456 SIN3BO75182 1162 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 LUC7L3O95232 432 aaKnown RBP22.91■■□□□ 1.26
VTI1B-201ENST00000216456 ERBB2P04626 1255 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 ATP5BP06576 529 aaKnown RBP22.91■■□□□ 1.26
VTI1B-201ENST00000216456 SYPP08247 313 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 GNSP15586 552 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 GGCXP38435 758 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 IRAK1P51617 712 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 NNTQ13423 1086 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 EIF4EBP2Q13542 120 aaPredicted RBP22.91■■□□□ 1.26
VTI1B-201ENST00000216456 CDH18Q13634 790 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 FAM183BPQ6ZVS7 135 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 RABEPKQ7Z6M1 372 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 SLC47A2Q86VL8 602 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 ADAM33Q9BZ11 813 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 SLC32A1Q9H598 525 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 THAP9Q9H5L6 903 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 SUSD2Q9UGT4 822 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 SLCO3A1Q9UIG8 710 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 PCNX2A6NKB5 2137 aa22.91■■□□□ 1.26
VTI1B-201ENST00000216456 APOEP02649 317 aa22.9■■□□□ 1.26
VTI1B-201ENST00000216456 CLCN1P35523 988 aa22.9■■□□□ 1.26
VTI1B-201ENST00000216456 CSNK1EP49674 416 aaKnown RBP22.9■■□□□ 1.26
VTI1B-201ENST00000216456 STK19P49842 368 aaPredicted RBP22.9■■□□□ 1.26
VTI1B-201ENST00000216456 MEA1Q16626 185 aa22.9■■□□□ 1.26
VTI1B-201ENST00000216456 MLKLQ8NB16 471 aa22.9■■□□□ 1.26
VTI1B-201ENST00000216456 PPP1R13BQ96KQ4 1090 aa22.9■■□□□ 1.26
VTI1B-201ENST00000216456 RPL10LQ96L21 214 aaKnown RBP22.9■■□□□ 1.26
VTI1B-201ENST00000216456 FAM204AQ9H8W3 233 aa22.9■■□□□ 1.26
VTI1B-201ENST00000216456 CFAP47Q6ZTR5 3102 aa22.9■■□□□ 1.26
VTI1B-201ENST00000216456 WDFY3Q8IZQ1 3526 aa22.9■■□□□ 1.26
VTI1B-201ENST00000216456 A0A1B0GVT2 93 aa22.89■■□□□ 1.25
VTI1B-201ENST00000216456 UPK3BL1B0FP48 263 aa22.89■■□□□ 1.25
VTI1B-201ENST00000216456 UPK3BL2E5RIL1 263 aa22.89■■□□□ 1.25
VTI1B-201ENST00000216456 H0Y626 953 aa22.89■■□□□ 1.25
VTI1B-201ENST00000216456 BCAT2O15382 392 aaPredicted RBP22.89■■□□□ 1.25
VTI1B-201ENST00000216456 CENPCQ03188 943 aa22.89■■□□□ 1.25
VTI1B-201ENST00000216456 TPD52L1Q16890 204 aaPredicted RBP22.89■■□□□ 1.25
VTI1B-201ENST00000216456 PTPN20Q4JDL3 420 aa22.89■■□□□ 1.25
VTI1B-201ENST00000216456 MIIPQ5JXC2 388 aa22.89■■□□□ 1.25
VTI1B-201ENST00000216456 BEND5Q7L4P6 421 aa22.89■■□□□ 1.25
VTI1B-201ENST00000216456 SLC2A13Q96QE2 648 aa22.89■■□□□ 1.25
VTI1B-201ENST00000216456 PRMT1Q99873 361 aaKnown RBP22.89■■□□□ 1.25
VTI1B-201ENST00000216456 DDX50Q9BQ39 737 aaKnown RBP22.89■■□□□ 1.25
VTI1B-201ENST00000216456 TMEM121BQ9BXQ6 578 aaPredicted RBP22.89■■□□□ 1.25
VTI1B-201ENST00000216456 DDIT4Q9NX09 232 aa22.89■■□□□ 1.25
VTI1B-201ENST00000216456 KLK13Q9UKR3 277 aa22.89■■□□□ 1.25
VTI1B-201ENST00000216456 ERVW-1Q9UQF0 538 aa22.89■■□□□ 1.25
VTI1B-201ENST00000216456 FNDC3AQ9Y2H6 1198 aaKnown RBP22.89■■□□□ 1.25
VTI1B-201ENST00000216456 KCNK3O14649 394 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 SEMA4FO95754 770 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 DNTTP04053 509 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 VAV1P15498 845 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 TFE3P19532 575 aaPredicted RBP22.88■■□□□ 1.25
VTI1B-201ENST00000216456 MZF1P28698 734 aaPredicted RBP22.88■■□□□ 1.25
VTI1B-201ENST00000216456 KCNMA1Q12791 1236 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 E2F5Q15329 346 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 HNRNPA1L2Q32P51 320 aaKnown RBP22.88■■□□□ 1.25
VTI1B-201ENST00000216456 OTUD1Q5VV17 481 aaPredicted RBP22.88■■□□□ 1.25
VTI1B-201ENST00000216456 ZNF776Q68DI1 518 aaPredicted RBP22.88■■□□□ 1.25
VTI1B-201ENST00000216456 OR6B2Q6IFH4 312 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 OLFML1Q6UWY5 402 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 OR52K2Q8NGK3 314 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 BIRC7Q96CA5 298 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 BTN2A3PQ96KV6 586 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 RSPH9Q9H1X1 276 aaPredicted RBP22.88■■□□□ 1.25
VTI1B-201ENST00000216456 SUN2Q9UH99 717 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 PCDHGC3Q9UN70 934 aa22.88■■□□□ 1.25
VTI1B-201ENST00000216456 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.88■■□□□ 1.25
VTI1B-201ENST00000216456 TYW5A2RUC4 315 aaKnown RBP22.87■■□□□ 1.25
VTI1B-201ENST00000216456 GTPBP10A4D1E9 387 aaKnown RBP22.87■■□□□ 1.25
VTI1B-201ENST00000216456 FAM47DPA6NHR8 397 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 KCNU1A8MYU2 1149 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 MID1O15344 667 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 FSBPO95073 299 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 C7P10643 843 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 PDGFRAP16234 1089 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 NME3Q13232 169 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 MAN2A1Q16706 1144 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 KCNT1Q5JUK3 1230 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 C9orf64Q5T6V5 341 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 UNQ6494/PRO21346Q6UXR6 183 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 C14orf80Q86SX3 495 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 MMAAQ8IVH4 418 aaKnown RBP22.87■■□□□ 1.25
VTI1B-201ENST00000216456 CHCHD4Q8N4Q1 142 aa22.87■■□□□ 1.25
VTI1B-201ENST00000216456 IGSF8Q969P0 613 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms