RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ITM2BQ9Y287 266 aa10.67□□□□□ -0.7
VCL-201ENST00000211998 NEXMIFQ5QGS0 1516 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 RCCD1A6NED2 376 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 CYP11B1P15538 503 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 SOAT1P35610 550 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 FBXW4P57775 412 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 TUBA3CQ13748 450 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 AGBL3Q8NEM8 1001 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 FAM120BQ96EK7 910 aaKnown RBP10.66□□□□□ -0.7
VCL-201ENST00000211998 YME1L1Q96TA2 773 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 RMND5AQ9H871 391 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 C12orf4Q9NQ89 552 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 ANAPC2Q9UJX6 822 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 TMCC3Q9ULS5 477 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 ACOT9Q9Y305 439 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 S100A6P06703 90 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 RARBP10826 455 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 RRM1P23921 792 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 SEPHS1P49903 392 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 GRB10Q13322 594 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 TSNQ15631 228 aaKnown RBP10.66□□□□□ -0.7
VCL-201ENST00000211998 TTC23Q5W5X9 447 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 GLB1LQ6UWU2 654 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 KIAA0408Q6ZU52 694 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 ECHDC2Q86YB7 292 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 EMC1Q8N766 993 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 GPRC5AQ8NFJ5 357 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 PIWIL2Q8TC59 973 aaKnown RBP10.66□□□□□ -0.7
VCL-201ENST00000211998 LRRC20Q8TCA0 184 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 UBE2OQ9C0C9 1292 aaKnown RBP10.66□□□□□ -0.7
VCL-201ENST00000211998 DNAJC18Q9H819 358 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 FAM49BQ9NUQ9 324 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 CNTNAP5Q8WYK1 1306 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 LMTK2Q8IWU2 1503 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 EDF1O60869 148 aaKnown RBP10.66□□□□□ -0.7
VCL-201ENST00000211998 ETS1P14921 441 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 C5orf22Q49AR2 442 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 ANGEL2Q5VTE6 544 aaKnown RBP10.66□□□□□ -0.7
VCL-201ENST00000211998 SCARA3Q6AZY7 606 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 NCCRP1Q6ZVX7 275 aaPredicted RBP10.66□□□□□ -0.7
VCL-201ENST00000211998 SNX31Q8N9S9 440 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 DAGLBQ8NCG7 672 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 ITFG1Q8TB96 612 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 SEMA4DQ92854 862 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 SH2D3AQ9BRG2 576 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 NIF3L1Q9GZT8 377 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 ELOVL6Q9H5J4 265 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 NUDT5Q9UKK9 219 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 GPR75-ASB3A0A0A6YYF3 556 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 CASP4P49662 377 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 CPT1AP50416 773 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 ST3GAL1Q11201 340 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 KHDC1Q4VXA5 237 aaKnown RBP10.66□□□□□ -0.7
VCL-201ENST00000211998 RASSF6Q6ZTQ3 369 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 KBTBD8Q8NFY9 601 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 SLC25A23Q9BV35 468 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 LATS2Q9NRM7 1088 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 CDH9Q9ULB4 789 aa10.66□□□□□ -0.7
VCL-201ENST00000211998 F8W810 466 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 POLRMTO00411 1230 aaKnown RBP10.65□□□□□ -0.7
VCL-201ENST00000211998 PYDC2Q56P42 97 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 C6orf52Q5T4I8 152 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 SAMD3Q8N6K7 520 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 LINC00116Q8NCU8 138 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 POP1Q99575 1024 aaKnown RBP10.65□□□□□ -0.7
VCL-201ENST00000211998 MLPHQ9BV36 600 aaPredicted RBP10.65□□□□□ -0.7
VCL-201ENST00000211998 GGA3Q9NZ52 723 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 POLG2Q9UHN1 485 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 DGKBQ9Y6T7 804 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 ZMYM2Q9UBW7 1377 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 AGPSO00116 658 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 CCNT2O60583 730 aaKnown RBP10.65□□□□□ -0.7
VCL-201ENST00000211998 MPOP05164 745 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 FOSL2P15408 326 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 POLR2EP19388 210 aaKnown RBP10.65□□□□□ -0.7
VCL-201ENST00000211998 ZNF157P51786 506 aaPredicted RBP10.65□□□□□ -0.7
VCL-201ENST00000211998 ZNF605Q86T29 641 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 CHSY1Q86X52 802 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 MYO1HQ8N1T3 1032 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 SLC4A5Q9BY07 1137 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 UNKQ9C0B0 810 aaKnown RBP10.65□□□□□ -0.7
VCL-201ENST00000211998 LRRC40Q9H9A6 602 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 PRDM5Q9NQX1 630 aaPredicted RBP10.65□□□□□ -0.7
VCL-201ENST00000211998 GNEQ9Y223 722 aaKnown RBP10.65□□□□□ -0.7
VCL-201ENST00000211998 PCDHA3Q9Y5H8 950 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 SLC30A1Q9Y6M5 507 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 A0A1W2PRG6 482 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 H3BNX3 289 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 PSMD11O00231 422 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 SERPINA6P08185 405 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 CYP2C9P11712 490 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 MUTP22033 750 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 CACNB2Q08289 660 aaPredicted RBP10.65□□□□□ -0.7
VCL-201ENST00000211998 KRT74Q7RTS7 529 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 ZNF276Q8N554 614 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 GRPEL2Q8TAA5 225 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 ETNPPLQ8TBG4 499 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 CENPIQ92674 756 aaPredicted RBP10.65□□□□□ -0.7
VCL-201ENST00000211998 SIPA1Q96FS4 1042 aa10.65□□□□□ -0.7
VCL-201ENST00000211998 NAT9Q9BTE0 207 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms