RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 TRMT10CQ7L0Y3 403 aaKnown RBP22.73■■□□□ 1.23
HOXC8-201ENST00000040584 PCDH19Q8TAB3 1148 aa22.73■■□□□ 1.23
HOXC8-201ENST00000040584 HAUS1Q96CS2 278 aa22.73■■□□□ 1.23
HOXC8-201ENST00000040584 PRO3102Q9H379 93 aa22.73■■□□□ 1.23
HOXC8-201ENST00000040584 RABEP2Q9H5N1 569 aa22.73■■□□□ 1.23
HOXC8-201ENST00000040584 PPANQ9NQ55 473 aaKnown RBP22.73■■□□□ 1.23
HOXC8-201ENST00000040584 HCFC1R1Q9NWW0 138 aa22.73■■□□□ 1.23
HOXC8-201ENST00000040584 ATG2AQ2TAZ0 1938 aa22.72■■□□□ 1.23
HOXC8-201ENST00000040584 ITIH2P19823 946 aa22.72■■□□□ 1.23
HOXC8-201ENST00000040584 NRIP1P48552 1158 aa22.72■■□□□ 1.23
HOXC8-201ENST00000040584 SMAD3P84022 425 aaKnown RBP22.72■■□□□ 1.23
HOXC8-201ENST00000040584 KCTD19Q17RG1 926 aaPredicted RBP22.72■■□□□ 1.23
HOXC8-201ENST00000040584 PABPC1LQ4VXU2 614 aaKnown RBP22.72■■□□□ 1.23
HOXC8-201ENST00000040584 ZNF697Q5TEC3 545 aa22.72■■□□□ 1.23
HOXC8-201ENST00000040584 RTL10Q7L3V2 364 aa22.72■■□□□ 1.23
HOXC8-201ENST00000040584 MICALL1Q8N3F8 863 aa22.72■■□□□ 1.23
HOXC8-201ENST00000040584 PQLC3Q8N755 202 aa22.72■■□□□ 1.23
HOXC8-201ENST00000040584 CSPG4P5Q96PW8 444 aa22.72■■□□□ 1.23
HOXC8-201ENST00000040584 RNF38Q9H0F5 515 aa22.72■■□□□ 1.23
HOXC8-201ENST00000040584 SAE1Q9UBE0 346 aaPredicted RBP22.72■■□□□ 1.23
HOXC8-201ENST00000040584 XPO7Q9UIA9 1087 aaKnown RBP22.72■■□□□ 1.23
HOXC8-201ENST00000040584 PAGE1O75459 146 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 OAS1P00973 400 aaKnown RBP22.71■■□□□ 1.23
HOXC8-201ENST00000040584 ARL4AP40617 200 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 SEC24CP53992 1094 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 SNX1Q13596 522 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.71■■□□□ 1.23
HOXC8-201ENST00000040584 SIK2Q9H0K1 926 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 EPB41L4BQ9H329 900 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 TRPC7Q9HCX4 862 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 TMEM51Q9NW97 253 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 RCOR3Q9P2K3 495 aaPredicted RBP22.71■■□□□ 1.23
HOXC8-201ENST00000040584 OR12D3Q9UGF7 316 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 MYO9BQ13459 2157 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 C5orf60A6NFR6 353 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 NRG2O14511 850 aaPredicted RBP22.71■■□□□ 1.23
HOXC8-201ENST00000040584 MYL4P12829 197 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 TUBP50607 506 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 TFDP2Q14188 446 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 DUSP6Q16828 381 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 TXNDC8Q6A555 127 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 KLHDC10Q6PID8 442 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 P3H4Q92791 437 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 HAPLN3Q96S86 360 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 ASAH2Q9NR71 780 aa22.71■■□□□ 1.23
HOXC8-201ENST00000040584 ANAPC1Q9H1A4 1944 aa22.7■■□□□ 1.22
HOXC8-201ENST00000040584 RGS16O15492 202 aaPredicted RBP22.7■■□□□ 1.22
HOXC8-201ENST00000040584 SLC2A3P11169 496 aa22.7■■□□□ 1.22
HOXC8-201ENST00000040584 GJA1P17302 382 aa22.7■■□□□ 1.22
HOXC8-201ENST00000040584 AMPD1P23109 780 aa22.7■■□□□ 1.22
HOXC8-201ENST00000040584 CYP4F8P98187 520 aa22.7■■□□□ 1.22
HOXC8-201ENST00000040584 SEMA3BQ13214 749 aa22.7■■□□□ 1.22
HOXC8-201ENST00000040584 SLC29A2Q14542 456 aa22.7■■□□□ 1.22
HOXC8-201ENST00000040584 PPP1R7Q15435 360 aa22.7■■□□□ 1.22
HOXC8-201ENST00000040584 CYP2S1Q96SQ9 504 aa22.7■■□□□ 1.22
HOXC8-201ENST00000040584 OSBPL2Q9H1P3 480 aa22.7■■□□□ 1.22
HOXC8-201ENST00000040584 H3BRJ5 948 aa22.69■■□□□ 1.22
HOXC8-201ENST00000040584 EEF2KO00418 725 aaKnown RBP22.69■■□□□ 1.22
HOXC8-201ENST00000040584 IGLV3-27P01718 113 aa22.69■■□□□ 1.22
HOXC8-201ENST00000040584 APOEP02649 317 aa22.69■■□□□ 1.22
HOXC8-201ENST00000040584 HOXA9P31269 272 aa22.69■■□□□ 1.22
HOXC8-201ENST00000040584 KCNJ1P48048 391 aa22.69■■□□□ 1.22
HOXC8-201ENST00000040584 KCNQ1P51787 676 aa22.69■■□□□ 1.22
HOXC8-201ENST00000040584 SLC9A4Q6AI14 798 aa22.69■■□□□ 1.22
HOXC8-201ENST00000040584 DRICH1Q6PGQ1 229 aaPredicted RBP22.69■■□□□ 1.22
HOXC8-201ENST00000040584 BBOF1Q8ND07 529 aa22.69■■□□□ 1.22
HOXC8-201ENST00000040584 ATXN3LQ9H3M9 355 aa22.69■■□□□ 1.22
HOXC8-201ENST00000040584 DNMT3BQ9UBC3 853 aaKnown RBP22.69■■□□□ 1.22
HOXC8-201ENST00000040584 HBS1LQ9Y450 684 aaKnown RBP22.69■■□□□ 1.22
HOXC8-201ENST00000040584 A0A1W2PRU2 124 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 APOC4-APOC2K7ER74 178 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 APOL1O14791 398 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 LIASO43766 372 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 FSBPO95073 299 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 APOC2P02655 101 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 HNRNPA1P09651 372 aaKnown RBP eCLIP22.68■■□□□ 1.22
HOXC8-201ENST00000040584 PECAM1P16284 738 aaPredicted RBP22.68■■□□□ 1.22
HOXC8-201ENST00000040584 MMP13P45452 471 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 KPNA1P52294 538 aaPredicted RBP22.68■■□□□ 1.22
HOXC8-201ENST00000040584 NPNTQ6UXI9 565 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 RFX8Q6ZV50 586 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 TAOK1Q7L7X3 1001 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 PLD5Q8N7P1 536 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 TTC13Q8NBP0 860 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 MRPL38Q96DV4 380 aaKnown RBP22.68■■□□□ 1.22
HOXC8-201ENST00000040584 SLC22A12Q96S37 553 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 ARHGEF4Q9NR80 690 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 GKN1Q9NS71 199 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 DPP7Q9UHL4 492 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 DOCK6Q96HP0 2047 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 ANKRD65E5RJM6 399 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 GAS8O95995 478 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 PTPN2P17706 415 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 CCR2P41597 374 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 RING1Q06587 406 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 C1orf228Q6PIY5 440 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 C6orf89Q6UWU4 347 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 ARL14EPQ8N8R7 260 aaPredicted RBP22.68■■□□□ 1.22
HOXC8-201ENST00000040584 ACTL9Q8TC94 416 aa22.68■■□□□ 1.22
HOXC8-201ENST00000040584 MRPS31Q92665 395 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms