RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 KAT2BQ92831 832 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 LRRC19Q9H756 370 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 A1CFQ9NQ94 594 aaKnown RBP16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 MBD2Q9UBB5 411 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 PTAR1Q7Z6K3 402 aaPredicted RBP16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 OSBPL11Q9BXB4 747 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 DMTF1Q9Y222 760 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 NCANO14594 1321 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 EARS2Q5JPH6 523 aaKnown RBP16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 CHMP1BQ7LBR1 199 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 CENPIQ92674 756 aaPredicted RBP16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 CRNNQ9UBG3 495 aaPredicted RBP16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 TRIM43BA6NCK2 446 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 MYL12BO14950 172 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 CHADO15335 359 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 DYNC1LI2O43237 492 aaPredicted RBP16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 IL6P05231 212 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 POU6F1Q14863 301 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 ZNF276Q8N554 614 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 ASZ1Q8WWH4 475 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 F5H5T6 163 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 TRIM38O00635 465 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 SUPT20HL2P0C7V6 817 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 TMEM62Q0P6H9 643 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 PCDH20Q8N6Y1 951 aaKnown RBP16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 PTCD3Q96EY7 689 aaKnown RBP16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 POLR1BQ9H9Y6 1135 aa16.24■□□□□ 0.19
RB1CC1-201ENST00000025008 RECQL5O94762 991 aaPredicted RBP16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 SEC24AO95486 1093 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 SPIRE1Q08AE8 756 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 SLC5A9Q2M3M2 681 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 WDR59Q6PJI9 974 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 RTL3Q8N8U3 475 aaKnown RBP16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 PIDD1Q9HB75 910 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 BLOC1S4Q9NUP1 217 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 SERPINA6P08185 405 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 CCT3P49368 545 aaKnown RBP16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 EPHX4Q8IUS5 362 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 IQCKQ8N0W5 287 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 FAM136AQ96C01 138 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 VAV3Q9UKW4 847 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 LCA5LO95447 670 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 INO80DQ53TQ3 878 aaPredicted RBP16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 ILDR2Q71H61 639 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 ARHGEF3Q9NR81 526 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 SH3BP1Q9Y3L3 701 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 MYL12AP19105 171 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 BST1Q10588 318 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 MZT2BQ6NZ67 158 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 OLFML1Q6UWY5 402 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 MAGEE2Q8TD90 523 aaPredicted RBP16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 EHD3Q9NZN3 535 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 A0A0U1RQJ8 604 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 PPP2R1BP30154 601 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 LACTB2Q53H82 288 aaPredicted RBP16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 LRRC38Q5VT99 294 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 TDRD10Q5VZ19 366 aaKnown RBP16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 ZNF470Q6ECI4 717 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 ZNF554Q86TJ5 538 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 XPNPEP3Q9NQH7 507 aa16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 RBM22Q9NW64 420 aaKnown RBP eCLIP16.23■□□□□ 0.193e-7■■■■■ 33.3
RB1CC1-201ENST00000025008 ARIH1Q9Y4X5 557 aaPredicted RBP16.23■□□□□ 0.19
RB1CC1-201ENST00000025008 EIF4BP23588 611 aaKnown RBP16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 RAP1GAPP47736 663 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 OXCT1P55809 520 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 DGCR6Q14129 220 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 TMEM132CQ8N3T6 1108 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 RP9Q8TA86 221 aaKnown RBP16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 SMAD5Q99717 465 aaKnown RBP16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 PRDM16Q9HAZ2 1276 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 ASTN2O75129 1339 aaPredicted RBP16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 A0A087X1B8 175 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 ALOX5P09917 674 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 STAG3L1P0CL83 205 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 VAV1P15498 845 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 EPB42P16452 691 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 CCNA2P20248 432 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 CDH3P22223 829 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 FGFR3P22607 806 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 VPS72Q15906 364 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 AMHR2Q16671 573 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 ZNF544Q6NX49 715 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 ISLR2Q6UXK2 745 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 ULK2Q8IYT8 1036 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 GMCL1Q96IK5 515 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 VAT1Q99536 393 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 POMKQ9H5K3 350 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 UBP1Q9NZI7 540 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 SF3B1O75533 1304 aaKnown RBP eCLIP16.22■□□□□ 0.199e-7■■■■■ 46
RB1CC1-201ENST00000025008 EDF1O60869 148 aaKnown RBP16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 CTSHP09668 335 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 HNRNPH3P31942 346 aaKnown RBP16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 PSME3P61289 254 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 TNK2Q07912 1038 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 PRELID2Q8N945 189 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 ACMSDQ8TDX5 336 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 SPIRE2Q8WWL2 714 aa16.22■□□□□ 0.19
RB1CC1-201ENST00000025008 CHID1Q9BWS9 393 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms