RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 GaaP70699 953 aa13.56□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Sppl2bQ3TD49 578 aa13.56□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Aarsd1Q3THG9 412 aa13.56□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Parp3Q3ULW8 533 aa13.56□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Nup85Q8R480 656 aaKnown RBP13.56□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Acot13Q9CQR4 140 aa13.56□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Rab27aQ9ERI2 221 aa13.56□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Aff4Q9ESC8 1160 aa13.56□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Pdpk1Q9Z2A0 559 aa13.56□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Aldoart1A6ZI46 419 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 IkbkgO88522 412 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Hoxc13P50207 328 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Igsf9Q05BQ1 1179 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Togaram2Q3TYG6 1002 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Lcp1Q61233 627 aaKnown RBP13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Wdtc1Q80ZK9 677 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Agbl2Q8CDK2 862 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Nox1Q8CIZ9 591 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Mrpl47Q8K2Y7 252 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Vmn1r203Q8R273 311 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Ophn1Q99J31 802 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Tmem68Q9D850 329 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Prl2a1Q9JHK0 228 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Wfdc16A2A5H4 111 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Zc3h7aE9PWW6 970 aaKnown RBP13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Kcna3P16390 528 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Tgm2P21981 686 aaKnown RBP13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Itih1Q61702 907 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Dnajc9Q91WN1 259 aaKnown RBP13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Catsper1Q91ZR5 686 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Kif12Q9D2Z8 642 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Zfp985A2A7A5 519 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Olfr726E9Q8X3 321 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Cdh18E9Q9Q6 790 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Olfr731F8VQB9 326 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Kng1O08677 661 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Hsd17b7O88736 334 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Cxcl9P18340 126 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Tbc1d10aP58802 500 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Fmo3P97501 534 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Olfr725Q05A45 321 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Smarcd1Q61466 515 aaKnown RBP13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Tas1r3Q925D8 858 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 PollQ9QXE2 573 aaKnown RBP13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Tmem115Q9WUH1 350 aa13.55□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 DcxO88809 366 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Pfdn6Q03958 127 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 B3gntl1Q3U129 357 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 PterQ60866 349 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Q6GQU0 248 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Rtl3Q6P1Y1 553 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Inpp4bQ6P1Y8 924 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Parp6Q6P6P7 630 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Ckap2lQ7TS74 745 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Clec1aQ8BWY2 269 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Ankrd49Q8VE42 238 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Homer3Q99JP6 356 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Zmat2Q9CPW7 199 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Fam162aQ9D6U8 155 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Tsga13Q9DA17 273 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 DcpsQ9DAR7 338 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 MylpfP97457 169 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Il6stQ00560 917 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Fam91a1Q3UVG3 837 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Zfp956Q3UZY6 572 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Creb3Q61817 404 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Man2a2Q8BRK9 1152 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Ankrd52Q8BTI7 1076 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Ap2b1Q9DBG3 937 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Gpatch1Q9DBM1 930 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Ndufa13Q9ERS2 144 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 PodxlQ9R0M4 503 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 PignQ9R1S3 931 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 PapolbQ9WVP6 641 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Armt1A6H630 439 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 A630010A05RikA9C473 232 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Slc4a9E9PUP3 929 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Gm8369E9PZI3 166 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Gm8257E9Q8R3 264 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Ebf2O08792 575 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Ctbp1O88712 441 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Nploc4P60670 608 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Glt6d1Q2NKH9 311 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Nrg1Q6DR99 700 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Zic5Q7TQ40 622 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Zdhhc17Q80TN5 632 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Pcsk9Q80W65 694 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 HscbQ8K3A0 234 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Fam114a2Q8VE88 497 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 MsraQ9D6Y7 233 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Col22a1E9Q7P1 1613 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Zfp626A0A0U1RQ84 676 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Ptp4a2O70274 167 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Gnat1P20612 350 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 M6prP24668 278 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Serpina6Q06770 397 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Soat1Q61263 540 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Xlr3cQ61806 226 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Slc17a6Q8BLE7 582 aa13.54□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Acad10Q8K370 1069 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms