RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 H2afyQ9QZQ8 372 aaKnown RBP6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Spo11Q9WTK8 396 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gm36028A0A0U1RPM1 299 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Lrrc72A0A1Y7VMI0 288 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Tbkbp1A2A9T0 611 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Apol7bB1AQP7 369 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Smok3aC0HKC8 504 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Smok3bC0HKC9 504 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 DgkhD3YXJ0 1156 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Arhgef26D3YYY8 869 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Ifit3bE9PV48 403 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gm3636E9Q5P1 227 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gm3424L7N298 263 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gm8246M0QWX9 263 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Tnfrsf11bO08712 401 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Cyp27b1O35084 507 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Slc1a6O35544 561 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 NoctO35710 429 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Grk4O70291 574 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Cdh16O88338 830 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gsta4P24472 222 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Asgr1P34927 284 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Tbxas1P36423 533 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Mkl2P59759 1080 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Slc16a10Q3U9N9 512 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Smcr8Q3UMB5 935 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Apol7eQ3UZ24 369 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 NkaplQ5SZT7 395 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Fam169aQ5XG69 665 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 CybbQ61093 570 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gstt2Q61133 244 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 ClmQ7TSN2 230 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Pnma8aQ80VM8 430 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Btbd10Q80X66 475 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Mical2Q8BML1 960 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Uba6Q8C7R4 1053 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Scara3Q8C850 606 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Snx30Q8CE50 437 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Ace2Q8R0I0 805 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Fbxw7Q8VBV4 629 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Lrrc14Q8VC16 493 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Ddx1Q91VR5 740 aaKnown RBP6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Hkdc1Q91W97 915 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 FdpsQ920E5 353 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Tmco1Q921L3 188 aaKnown RBP6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Nmd3Q99L48 503 aaKnown RBP6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Bco2Q99NF1 532 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Psmd8Q9CX56 353 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Dcp2Q9CYC6 422 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Jmjd6Q9ERI5 403 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gucy1a3Q9ERL9 691 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Dpp7Q9ET22 506 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Ggt5Q9Z2A9 573 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 Trpm7Q923J1 1863 aa6.43□□□□□ -1.38
Lig4-202ENSMUST00000170033 AspgA0JNU3 564 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gm3755K7N743 167 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Vmn2r39L7N2E5 861 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gm3033M0QWI0 180 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gm3532M0QWL4 194 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Akap1O08715 857 aaKnown RBP6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Vmn2r1O70410 912 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Ppp3ccP48455 513 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Ccr1P51675 355 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gabpb1Q00420 383 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Creb1Q01147 341 aaKnown RBP6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 OtulinQ3UCV8 352 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Trmt10cQ3UFY8 414 aaKnown RBP6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Armc7Q3UJZ3 198 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Mthfd1lQ3V3R1 977 aaKnown RBP6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 B3gnt3Q5JCS9 372 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Shroom1Q5SX79 823 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Kiaa1328Q6NZK5 612 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gucy2gQ6TL19 1100 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Cnpy4Q8BQ47 245 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Arhgef33Q8BW86 850 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Dcun1d2Q8BZJ7 259 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Dis3lQ8C0S1 1053 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Lca5lQ8C0X0 741 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Arhgap29Q8CGF1 1266 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Tbc1d13Q8R3D1 400 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Mgat5Q8R4G6 740 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gramd1aQ8VEF1 722 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Pip4k2cQ91XU3 421 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Subh2bvQ9D9Z7 123 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Tor1bQ9ER41 336 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Rad18Q9QXK2 509 aaKnown RBP6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 C1qtnf1Q9QXP7 281 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 NumbQ9QZS3 653 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Mapk13Q9Z1B7 366 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Map7d3A2AEY4 876 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Fam166bA2AIP0 273 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Trim5E9PV98 497 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gm6205E9PZS2 359 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Rgsl1H3BL40 1073 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 FaahO08914 579 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 NumblO08919 604 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Ifnar2O35664 513 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Gnl1P36916 607 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 AdslP54822 484 aa6.42□□□□□ -1.38
Lig4-202ENSMUST00000170033 Cdk7Q03147 346 aa6.42□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms