RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Cog2Q921L5 731 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 KlbQ99N32 1043 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Wfdc1Q9ESH5 211 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Plagl1Q9JLQ4 704 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Atp6v1b2P62814 511 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Sparcl1P70663 650 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Pdk1Q8BFP9 434 aaKnown RBP16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Fam160b1Q8CDM8 764 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Irak3Q8K4B2 609 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Nup85Q8R480 656 aaKnown RBP16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Snx15Q91WE1 337 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 FtcdQ91XD4 541 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Q922R1 422 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Tmbim4Q9DA39 238 aa16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 EtfbQ9DCW4 255 aaKnown RBP16.42■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Pcna-ps2A0A140T8V5 261 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Dennd5bA2RSQ0 1274 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Gm379J3QQ19 296 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 BpgmP15327 259 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 PcnaP17918 261 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 HmgcrQ01237 887 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Krt26Q3TRJ4 462 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Tmem237Q3V0J1 427 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Rxfp1Q6R6I7 758 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Nacc1Q7TSZ8 514 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Fnip2Q80TD3 1108 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ddx42Q810A7 929 aaKnown RBP16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 TbcdQ8BYA0 1196 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Pcdha11Q91Y19 950 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 CtsqQ91ZF4 343 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Pdk3Q922H2 415 aaKnown RBP16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ttc3O88196 1979 aaKnown RBP16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Klhl41A2AUC9 606 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Dsg3O35902 993 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Tnk2O54967 1055 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Adcy1O88444 1118 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Arl13bQ640N2 427 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 PigaQ64323 485 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Gba2Q69ZF3 918 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Xpo1Q6P5F9 1071 aaKnown RBP16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Sort1Q6PHU5 825 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Gja6Q6S5G4 283 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Olfr1415Q7TQS4 311 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ccdc40Q8BI79 1192 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Olfr1416Q8VGU4 312 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Atg7Q9D906 698 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 DcpsQ9DAR7 338 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Pgam1Q9DBJ1 254 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 GghQ9Z0L8 317 aa16.41■□□□□ 0.22
Ckap4-201ENSMUST00000053871 MipepA6H611 711 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ifi206G3UZV2 921 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Mup13L7N222 235 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 EsrraO08580 422 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Myl4P09541 193 aaKnown RBP16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Zfy2P20662 777 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Crabp2P22935 138 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Asgr1P34927 284 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Morf4l1P60762 362 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Mief2Q5NCS9 454 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Snx9Q91VH2 595 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Actrt2Q9D9L5 377 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Wnt8bQ9WUD6 350 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Tnfrsf14A0A1W2P7D5 276 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 C1qbpO35658 278 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Fam167bP17257 162 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Slc6a13P31649 602 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Foxred2Q3USW5 665 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Klra8Q60682 266 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Has1Q61647 583 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 ScapQ6GQT6 1276 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Abhd10Q6PE15 297 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Rimbp2Q80U40 1072 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Reps2Q80XA6 521 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Tmem209Q8BRG8 561 aaKnown RBP16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Q8CCC3 530 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Sik2Q8CFH6 931 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 DolkQ8R2Y3 534 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Vangl2Q91ZD4 521 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Ophn1Q99J31 802 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Tpgs1Q99MS8 303 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 AenQ9CZI9 336 aaKnown RBP16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 4930513O06RikQ9D549 161 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Syde1Q9DBZ9 737 aa16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Top3bQ9Z321 862 aaKnown RBP16.4■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Cyp4f17G3UW78 524 aa16.39■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Gm3336J3QMQ6 198 aa16.39■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Foxm1O08696 760 aa16.39■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Cyp2b10P12791 500 aa16.39■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Il12aP43431 215 aa16.39■□□□□ 0.22
Ckap4-201ENSMUST00000053871 SowahcQ8C0J6 512 aa16.39■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Mbtps2Q8CHX6 515 aa16.39■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Vmn1r191Q8K4D0 298 aa16.39■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Smg8Q8VE18 991 aa16.39■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Cyp4f16Q99N17 524 aa16.39■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Abcg3Q99P81 650 aa16.39■□□□□ 0.22
Ckap4-201ENSMUST00000053871 RalbQ9JIW9 206 aa16.39■□□□□ 0.22
Ckap4-201ENSMUST00000053871 Nedd9O35177 833 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Dnmt3cP0DOY1 709 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 SnnP61807 88 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Zbtb48Q1H9T6 681 aa16.39■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 134.2 ms