RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Spg21Q9CQC8 308 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Oxct2bQ9ESL0 520 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Oxct2aQ9JJN4 520 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 PtsQ9R1Z7 144 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Mical3Q8CJ19 1993 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Adamtsl1Q8BLI0 1745 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 AunipE9Q6Z5 340 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Cyp2b19O55071 492 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Siah1bQ06985 282 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 GpamQ61586 827 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 SyncripQ7TMK9 623 aaKnown RBP12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ing3Q8VEK6 421 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Znf622Q91VY9 476 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 WwoxQ91WL8 414 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Myh3P13541 1940 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ms4a4aA0A087WRT7 236 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Zfp558E9Q1J0 407 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Foxm1O08696 760 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ptpn1P35821 432 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Sparcl1P70663 650 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Shroom1Q5SX79 823 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 TxlngQ8BHN1 524 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Q8BP99 230 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Klhl2Q8JZP3 593 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Mtrf1Q8K126 446 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Mrpl1Q99N96 336 aaKnown RBP12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ephx1Q9D379 455 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Tmem79Q9D709 391 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Oma1Q9D8H7 521 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gpatch1Q9DBM1 930 aa12.15□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Wdr49A0A0N4SUK7 710 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Catsperg2C6KI89 1145 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gm21293E9Q4G9 266 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 PargO88622 969 aaKnown RBP12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 TecP24604 630 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Abce1P61222 599 aaKnown RBP12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Lipo3Q3UT41 399 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Cln3Q61124 438 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Lrrc8eQ66JT1 795 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ror1Q9Z139 937 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Vmn2r74E9PW21 853 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gml2G5E8L7 176 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ctbp1O88712 441 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Krt6aP50446 553 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Zyg11bQ3UFS0 744 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Trim75Q3UWZ0 467 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Recql4Q75NR7 1216 aaKnown RBP12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Lrrc8dQ8BGR2 859 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Slc18a2Q8BRU6 517 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Kifc1Q9QWT9 674 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Magel2Q9QZ04 1284 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ggt5Q9Z2A9 573 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ubr2Q6WKZ8 1755 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Fpr-rs4A4FUQ5 323 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gbp11A9YVJ5 442 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Fam124aD3Z5V4 536 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Capn6O35646 641 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Pde9aO70628 534 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Scrg1O88745 98 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ripk2P58801 539 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Adra1dP97714 562 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Plk1Q07832 603 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 1700061G19RikQ08EE8 705 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Sh3rf3Q8C120 878 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Vmn1r206Q8R277 312 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ggt7Q99JP7 662 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Sned1Q70E20 1403 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Skint7A7XV04 395 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Vmn2r7E9PYL5 915 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Vmn2r3H3BJ88 915 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Vmn2r6H3BK29 913 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Spout1Q3UHX9 385 aaKnown RBP12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Cyp4f37Q3V1F1 546 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Q80WR5 230 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 TbcdQ8BYA0 1196 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 SntnQ8C9X1 147 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Hacd3Q8K2C9 362 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Nle1Q8VEJ4 485 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Tbrg4Q91YM4 630 aaKnown RBP12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Mrps2Q924T2 291 aaKnown RBP12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Tnip2Q99JG7 430 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gstt4Q9D4P7 240 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Btbd19S4R1I0 287 aa12.14□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Srp72F8VQC1 671 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 PrkchP23298 683 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Colec11Q3SXB8 272 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Pyroxd1Q3TMV7 498 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Six2Q62232 296 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Galnt10Q6P9S7 603 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Samd7Q8C8Y5 445 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 SarafQ8R3Q0 334 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Cables1Q9ESJ1 568 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Syndig1A2ANU3 258 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gm5861F6VCN9 180 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 4933402N22RikF7D1B3 190 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 RcvrnP34057 202 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Epb41l4aP52963 686 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 RelaQ04207 549 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Pcsk7Q61139 770 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Cyp3a11Q64459 504 aa12.13□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 69.4 ms