RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 DarsQ922B2 501 aaKnown RBP8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Q9CPS8 106 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ing2Q9ESK4 281 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 AuhQ9JLZ3 314 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ccdc8D3YZV8 685 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ercc2O08811 760 aaKnown RBP8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 EgfP01132 1217 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Glud1P26443 558 aaKnown RBP8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ccdc127Q3TC33 260 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Pik3r6Q3U6Q4 756 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Arl13bQ640N2 427 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Lrrc8eQ66JT1 795 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Elmo2Q8BHL5 732 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Zmym6Q8BS54 1249 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Olfr784Q8VFZ9 319 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 SncaipQ99ME3 962 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Mzf1S4R1L6 814 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Mcf2A2AEU1 1111 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Gm12394A2AKP6 982 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Klhl41A2AUC9 606 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Gm7942L7N277 499 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Htr2cP34968 459 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Cpne7Q0VE82 557 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ppp1r12bQ8BG95 976 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Tmem220Q8BP07 167 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Cox18Q8VC74 331 aa8.68□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Gm28043E0CXC2 719 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 AgxtO35423 414 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Sptlc1O35704 473 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 CstaP56567 97 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 MylpfP97457 169 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ccdc61Q3UJV1 511 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Nr2c1Q505F1 590 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Xlr3aQ60595 226 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Foxd4Q60688 444 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Trpv1Q704Y3 839 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ticam2Q8BJQ4 232 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Washc5Q8C2E7 1159 aaKnown RBP8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Pacs1Q8K212 961 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Rnf31Q924T7 1066 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 PawrQ925B0 333 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Rwdd4Q9CPR1 188 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 PollQ9QXE2 573 aaKnown RBP8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 CdylQ9WTK2 593 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Gbp6A0A0G2JDV3 611 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Vmn2r84D3YWE3 849 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Wdr95D3Z7A8 784 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Maml3D4QGC2 1135 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Olfr731F8VQB9 326 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Gm43302L7N1X8 611 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Kifc3O35231 824 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 NoctO35710 429 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Asgr1P34927 284 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Rpl10aP53026 217 aaKnown RBP8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 P3h1Q3V1T4 739 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Kansl1lQ5DTI6 991 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Pcid2Q8BFV2 399 aaKnown RBP8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Exoc3l1Q8BI71 739 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Q8BZE1 841 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Nol6Q8R5K4 1152 aaKnown RBP8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Cybrd1Q925G2 290 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Psip1Q99JF8 528 aaKnown RBP8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Alg13Q9D8C3 1166 aaKnown RBP8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Scube2Q9JJS0 997 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Fut2Q9JL27 347 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Slc2a4P14142 509 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 TraddQ3U0V2 310 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Yipf3Q3UDR8 347 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Vps51Q3UVL4 782 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Pfdn4Q3UWL8 134 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 PterQ60866 349 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Gstt2Q61133 244 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Orai3Q6P8G8 290 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Dnajb13Q80Y75 316 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 AgpsQ8C0I1 645 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Lrrc56Q8K375 552 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Q8R1Y2 203 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Oit3Q8R4V5 546 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Slc25a3Q8VEM8 357 aaKnown RBP8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Zfp617Q91WM0 559 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Traf7Q922B6 594 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Zfp655Q9CZP3 541 aaKnown RBP8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 CinpQ9D0V8 212 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Q9D4A5 307 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Stk11Q9WTK7 436 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Zbtb11G5E8B9 1050 aaKnown RBP8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Sult1e1P49891 295 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Epas1P97481 874 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Xkr4Q5GH67 647 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Trim14Q8BVW3 440 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 HscbQ8K3A0 234 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Nup85Q8R480 656 aaKnown RBP8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Tlr9Q9EQU3 1032 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Cul3Q9JLV5 768 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Slc4a9E9PUP3 929 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Apol11bE9PUZ0 337 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Cyp2t4E9PWV0 503 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Zfp651E9PZ11 729 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Gm3164L7N2B9 238 aa8.67□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Gm3264L7N2C5 238 aa8.67□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms