RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Rnft1Q9DCN7 395 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Hipk3Q9ERH7 1192 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Thap11Q9JJD0 305 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cnga3Q9JJZ8 631 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm3893E9Q1I1 302 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 BhmtO35490 407 aaKnown RBP9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Msh3P13705 1091 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cpa3P15089 417 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Emilin3P59900 758 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cdc42P60766 191 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Abi2P62484 446 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ap5z1Q3U829 807 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Hdgfl2Q3UMU9 669 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fam91a1Q3UVG3 837 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Brsk2Q69Z98 735 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cfap206Q6PE87 622 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Clca4aQ6Q473 924 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tmem260Q8BMD6 703 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rbms3Q8BWL5 431 aaKnown RBP9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 LnpepQ8C129 1025 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Nlrp10Q8CCN1 673 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Atg14Q8CDJ3 492 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Slc25a38Q91XD8 326 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gpn3Q9D3W4 284 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mss51Q9D5Z5 446 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cyp2c55Q9D816 490 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tnfaip8l2Q9D8Y7 184 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Stk4Q9JI11 487 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 AspgA0JNU3 564 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Magea10A2AMW4 325 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 EXOC1LB9EK06 172 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 C2cd2E9Q3C1 696 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 TpteG5E8H5 664 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Klf6O08584 283 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Q3UJP5 209 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 CyldQ80TQ2 952 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tyw1Q8BJM7 721 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rab36Q8CAM5 267 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Spag16Q8K450 639 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Olfr1414Q8VGU5 312 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Elp3Q9CZX0 547 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 MymkQ9D1N4 221 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Serpina1fQ9DCQ7 411 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ap3s1Q9DCR2 193 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mpp6Q9JLB0 553 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Kifc1Q9QWT9 674 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Racgap1Q9WVM1 628 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Lcn5A2AJB7 192 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Wdr72D3YYM4 1114 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Usp17lbE9Q9U0 468 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 SagP20443 403 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Trmt1Q3TX08 663 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Abi3bpQ59IW6 1179 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Klra6Q60653 266 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Atp11bQ6DFW5 1175 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fam126aQ6P9N1 521 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Klhl17Q6TDP3 640 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 SyncripQ7TMK9 623 aaKnown RBP9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Nrde2Q80XC6 1172 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Atp2c1Q80XR2 918 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pop1Q8K205 1045 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Adgrg1Q8K209 687 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 BlmhQ8R016 455 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Prpf19Q99KP6 504 aaKnown RBP9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Lyrm1Q9CQB7 122 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Exo5Q9CXP9 373 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Vps28Q9D1C8 221 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Stap1Q9JM90 297 aaKnown RBP9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 PolkQ9QUG2 852 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gria1P23818 907 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ksr1Q61097 873 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 LbpQ61805 481 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cdc14bQ6PFY9 485 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Dsg1bQ7TSF1 1060 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Kansl2Q8BQR4 486 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fam180aQ8BR21 173 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Slitrk6Q8C110 840 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 4931406P16RikQ8C5X1 1059 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mcoln2Q8K595 566 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ero1bQ8R2E9 467 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pcdhgb5Q91XX5 926 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Nmd3Q99L48 503 aaKnown RBP9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mgrn1Q9D074 532 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Serpinb1aQ9D154 379 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Prl2a1Q9JHK0 228 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Clcn2Q9R0A1 908 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 CercamA3KGW5 592 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 RerglB2RVE2 204 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Aldh1a7O35945 501 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Aldh1a1P24549 501 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mmp13P33435 472 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 BtkP35991 659 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Epha2Q03145 977 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Colec11Q3SXB8 272 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 OgnQ62000 298 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Sema5aQ62217 1077 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Klhl23Q6GQU2 558 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Josd2Q9CR30 188 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 S100pbpQ9D5K4 396 aa9.34□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 MrrfQ9D6S7 262 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms