RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 OVCA2Q8WZ82 227 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 DPF3Q92784 378 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 ZNF512Q96ME7 567 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-232ENST00000641947 ZIM3Q96PE6 472 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 LBHD1Q9BQE6 289 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-232ENST00000641947 FAM129AQ9BZQ8 928 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 PRDM16Q9HAZ2 1276 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 DNAJC17Q9NVM6 304 aaKnown RBP18.14■□□□□ 0.49
PHGDH-232ENST00000641947 STK39Q9UEW8 545 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 TCRBV7S3A2A0A539 114 aa18.13■□□□□ 0.49
PHGDH-232ENST00000641947 STIP1P31948 543 aaKnown RBP18.13■□□□□ 0.49
PHGDH-232ENST00000641947 IRAK1P51617 712 aa18.13■□□□□ 0.49
PHGDH-232ENST00000641947 CREMQ03060 361 aa18.13■□□□□ 0.49
PHGDH-232ENST00000641947 PRKD1Q15139 912 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-232ENST00000641947 PLPP4Q5VZY2 271 aa18.13■□□□□ 0.49
PHGDH-232ENST00000641947 DNAJB7Q7Z6W7 309 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-232ENST00000641947 POF1BQ8WVV4 589 aa18.13■□□□□ 0.49
PHGDH-232ENST00000641947 CPT1BQ92523 772 aa18.13■□□□□ 0.49
PHGDH-232ENST00000641947 MTRF1LQ9UGC7 380 aaKnown RBP18.13■□□□□ 0.49
PHGDH-232ENST00000641947 TPX2Q9ULW0 747 aaKnown RBP18.13■□□□□ 0.49
PHGDH-232ENST00000641947 C2orf78A6NCI8 922 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 C2orf71A6NGG8 1288 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 NRG2O14511 850 aaPredicted RBP18.12■□□□□ 0.49
PHGDH-232ENST00000641947 COCHO43405 550 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 ELF1P32519 619 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 KCNQ1P51787 676 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 ZNF135P52742 658 aaPredicted RBP18.12■□□□□ 0.49
PHGDH-232ENST00000641947 CAMK1Q14012 370 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 MS4A13Q5J8X5 152 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 RWDD4Q6NW29 188 aaKnown RBP18.12■□□□□ 0.49
PHGDH-232ENST00000641947 ZNF276Q8N554 614 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 PDZD8Q8NEN9 1154 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 CCDC110Q8TBZ0 833 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 PRCCQ92733 491 aaPredicted RBP18.12■□□□□ 0.49
PHGDH-232ENST00000641947 PSMG2Q969U7 264 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 LRRC45Q96CN5 670 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 PRDM12Q9H4Q4 367 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 LRRC4CQ9HCJ2 640 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 ENTPD7Q9NQZ7 604 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 NDFIP2Q9NV92 336 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 LZTS1Q9Y250 596 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 IRAK3Q9Y616 596 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 NOTCH4Q99466 2003 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 CHD5Q8TDI0 1954 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 CFAP69A5D8W1 941 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 E9PAM4 449 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 TMEM63AO94886 807 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 MLLT6P55198 1093 aaPredicted RBP18.12■□□□□ 0.49
PHGDH-232ENST00000641947 NRG1Q02297 640 aaPredicted RBP18.12■□□□□ 0.49
PHGDH-232ENST00000641947 CCDC25Q86WR0 208 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 TFB1MQ8WVM0 346 aaKnown RBP18.12■□□□□ 0.49
PHGDH-232ENST00000641947 MYEOVQ96EZ4 313 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 SEMA4AQ9H3S1 761 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 IL21Q9HBE4 155 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 SSX2IPQ9Y2D8 614 aa18.12■□□□□ 0.49
PHGDH-232ENST00000641947 HELZP42694 1942 aaKnown RBP18.11■□□□□ 0.49
PHGDH-232ENST00000641947 GOLGA6BA6NDN3 693 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 H0YGN5 161 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 IRS1P35568 1242 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 PMS2P54278 862 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 FAM193AP78312 1265 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 CAV1Q03135 178 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 VEPH1Q14D04 833 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 SHHQ15465 462 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 NADSYN1Q6IA69 706 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 NAT8LQ8N9F0 302 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 BBOF1Q8ND07 529 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 OR2W6PQ8NHA6 318 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 DEPDC1BQ8WUY9 529 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 UBLCP1Q8WVY7 318 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-232ENST00000641947 TBC1D31Q96DN5 1066 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 CELF6Q96J87 481 aaKnown RBP18.11■□□□□ 0.49
PHGDH-232ENST00000641947 C1orf74Q96LT6 269 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 PRMT1Q99873 361 aaKnown RBP18.11■□□□□ 0.49
PHGDH-232ENST00000641947 RNF38Q9H0F5 515 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 MTIF3Q9H2K0 278 aaKnown RBP18.11■□□□□ 0.49
PHGDH-232ENST00000641947 MPP6Q9NZW5 540 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 VANGL2Q9ULK5 521 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 MAFFQ9ULX9 164 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 NFS1Q9Y697 457 aa18.11■□□□□ 0.49
PHGDH-232ENST00000641947 HACD1B0YJ81 288 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 C5orf67F2Z3F1 127 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 GRM6O15303 877 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 SYF2O95926 243 aaKnown RBP18.1■□□□□ 0.49
PHGDH-232ENST00000641947 OAS1P00973 400 aaKnown RBP18.1■□□□□ 0.49
PHGDH-232ENST00000641947 APOEP02649 317 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 F11P03951 625 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 SLC2A3P11169 496 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 MAGEA10P43363 369 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-232ENST00000641947 EPHB3P54753 998 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 RING1Q06587 406 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 MORF4L2Q15014 288 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 HECTD3Q5T447 861 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 FAXCQ5TGI0 409 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 ARHGAP12Q8IWW6 846 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 ZCCHC9Q8N567 271 aaKnown RBP18.1■□□□□ 0.49
PHGDH-232ENST00000641947 MRPL43Q8N983 215 aaKnown RBP18.1■□□□□ 0.49
PHGDH-232ENST00000641947 HTR3CQ8WXA8 447 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 WBP2Q969T9 261 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 BTN2A3PQ96KV6 586 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms