RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 CDC25BP30305 580 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 CORO1AP31146 461 aaKnown RBP10.47□□□□□ -0.73
PHGDH-222ENST00000641587 GTF2H1P32780 548 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 PIK3CAP42336 1068 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 PLA2G4AP47712 749 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 KIF11P52732 1056 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 AP3M2P53677 418 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 ENPEPQ07075 957 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 CYP4F3Q08477 520 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 EFEMP1Q12805 493 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 ZACNQ401N2 412 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 CBWD6Q4V339 395 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 CCDC157Q569K6 752 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 CBWD3Q5JTY5 395 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 CBWD5Q5RIA9 395 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 C1orf220Q5T0J3 134 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 KRT39Q6A163 491 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 KLHDC10Q6PID8 442 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 SV2AQ7L0J3 742 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 METTL3Q86U44 580 aaKnown RBP10.47□□□□□ -0.73
PHGDH-222ENST00000641587 VSTM4Q8IW00 320 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 RBBP8NLQ8NC74 664 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-222ENST00000641587 CADM4Q8NFZ8 388 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 RHBDD1Q8TEB9 315 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 PRCCQ92733 491 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-222ENST00000641587 CYFIP2Q96F07 1278 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 PIWIL1Q96J94 861 aaKnown RBP10.47□□□□□ -0.73
PHGDH-222ENST00000641587 HNRNPABQ99729 332 aaKnown RBP10.47□□□□□ -0.73
PHGDH-222ENST00000641587 CIPCQ9C0C6 399 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 C6orf106Q9H6K1 298 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-222ENST00000641587 APOBEC3GQ9HC16 384 aaKnown RBP10.47□□□□□ -0.73
PHGDH-222ENST00000641587 SLC27A6Q9Y2P4 619 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 SNX11Q9Y5W9 270 aa10.47□□□□□ -0.73
PHGDH-222ENST00000641587 A0A1W2PQC6 194 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 P4HA2O15460 535 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 SYNCRIPO60506 623 aaKnown RBP10.46□□□□□ -0.73
PHGDH-222ENST00000641587 DKK1O94907 266 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 ASS1P00966 412 aaKnown RBP10.46□□□□□ -0.73
PHGDH-222ENST00000641587 IGLV3-19P01714 112 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 PRB1P04280 392 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 EPHX1P07099 455 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 ZNF883P0CG24 379 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 ACADMP11310 421 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 CD58P19256 250 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 ACSL1P33121 698 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 KLK7P49862 253 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 CLDN6P56747 220 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 IL9RQ01113 521 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 CCDC173Q0VFZ6 552 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 CAMK2BQ13554 666 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 EXOC3L4Q17RC7 722 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 SGSM1Q2NKQ1 1148 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 KIF19Q2TAC6 998 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 KCNT1Q5JUK3 1230 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 SPECC1LQ69YQ0 1117 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 CCDC186Q7Z3E2 898 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 ANKS1BQ7Z6G8 1248 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 UNC93AQ86WB7 457 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 DENND1CQ8IV53 801 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 NEK11Q8NG66 645 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 CYB5D2Q8WUJ1 264 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 ERGIC2Q96RQ1 377 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 INTS2Q9H0H0 1204 aaKnown RBP10.46□□□□□ -0.73
PHGDH-222ENST00000641587 FAM207AQ9NSI2 230 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-222ENST00000641587 ELOVL2Q9NXB9 296 aa10.46□□□□□ -0.73
PHGDH-222ENST00000641587 AGO1Q9UL18 857 aaKnown RBP10.46□□□□□ -0.73
PHGDH-222ENST00000641587 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.46□□□□□ -0.731e-6■□□□□ 10.9
PHGDH-222ENST00000641587 PLXNA2O75051 1894 aa10.46□□□□□ -0.74
PHGDH-222ENST00000641587 GCN1Q92616 2671 aaKnown RBP10.46□□□□□ -0.74
PHGDH-222ENST00000641587 ITIH6Q6UXX5 1313 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 GTPBP10A4D1E9 387 aaKnown RBP10.45□□□□□ -0.74
PHGDH-222ENST00000641587 TRABD2BA6NFA1 517 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 FLRT2O43155 660 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 TSPAN3O60637 253 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 P4HA1P13674 534 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 TRIM21P19474 475 aaKnown RBP10.45□□□□□ -0.74
PHGDH-222ENST00000641587 INCA1Q0VD86 236 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 LRMPQ12912 555 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 ZNF394Q53GI3 561 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 PPP1R26Q5T8A7 1209 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-222ENST00000641587 DHRS13Q6UX07 377 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 SERPINA13PQ6UXR4 307 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 DBX2Q6ZNG2 339 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 CCDC150Q8NCX0 1101 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 FBXL13Q8NEE6 735 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 TAS1R2Q8TE23 839 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 UCMAQ8WVF2 138 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 NDRG1Q92597 394 aaKnown RBP10.45□□□□□ -0.74
PHGDH-222ENST00000641587 NUP58Q9BVL2 599 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 NT5C1AQ9BXI3 368 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 IMPG2Q9BZV3 1241 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 LHX5Q9H2C1 402 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 TM9SF3Q9HD45 589 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 SCUBE2Q9NQ36 999 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 KIAA1522Q9P206 1035 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-222ENST00000641587 SIK3Q9Y2K2 1263 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 USP3Q9Y6I4 520 aa10.45□□□□□ -0.74
PHGDH-222ENST00000641587 SLC12A8A0AV02 714 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 H0Y8X5 98 aa10.44□□□□□ -0.74
PHGDH-222ENST00000641587 CBX4O00257 560 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms