RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 RWDD4Q6NW29 188 aaKnown RBP9.14□□□□□ -0.95
PHGDH-219ENST00000641513 RFX8Q6ZV50 586 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 PDZD4Q76G19 769 aaPredicted RBP9.14□□□□□ -0.95
PHGDH-219ENST00000641513 BZW1Q7L1Q6 419 aaKnown RBP9.14□□□□□ -0.95
PHGDH-219ENST00000641513 MIB1Q86YT6 1006 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 HERC6Q8IVU3 1022 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 GLIS1Q8NBF1 620 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 ZNF461Q8TAF7 563 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 ZNF473Q8WTR7 871 aaKnown RBP9.14□□□□□ -0.95
PHGDH-219ENST00000641513 LRRN4Q8WUT4 740 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 DPF3Q92784 378 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 ZNF512Q96ME7 567 aaPredicted RBP9.14□□□□□ -0.95
PHGDH-219ENST00000641513 SERPINB12Q96P63 405 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 CCT8L2Q96SF2 557 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 HTATIP2Q9BUP3 242 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 PCDH9Q9HC56 1237 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 ARHGEF4Q9NR80 690 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 OLA1Q9NTK5 396 aaKnown RBP9.14□□□□□ -0.95
PHGDH-219ENST00000641513 OSER1Q9NX31 292 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 SSX2IPQ9Y2D8 614 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 ATP8A1Q9Y2Q0 1164 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 MFHAS1Q9Y4C4 1052 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.13□□□□□ -0.95
PHGDH-219ENST00000641513 SLC12A8A0AV02 714 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 CFAP69A5D8W1 941 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 FAM72CH0Y354 149 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 DNALI1O14645 258 aaPredicted RBP9.13□□□□□ -0.95
PHGDH-219ENST00000641513 RIPK2O43353 540 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 MFSD11O43934 449 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 LPXNO60711 386 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 CXCL14O95715 111 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 IGLV3-25P01717 112 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 APOEP02649 317 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 ABHD2P08910 425 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 SPATA31D3P0C874 917 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 ATP2A2P16615 1042 aaKnown RBP9.13□□□□□ -0.95
PHGDH-219ENST00000641513 KLRC2P26717 231 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 RBL1P28749 1068 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 NR2C2P49116 596 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 ATP1A2P50993 1020 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 EPHB3P54753 998 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 GDF10P55107 478 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 HTRA4P83105 476 aaPredicted RBP9.13□□□□□ -0.95
PHGDH-219ENST00000641513 GUCY1A3Q02108 690 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 CREMQ03060 361 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 AP1B1Q10567 949 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 TWF1Q12792 350 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 PLD1Q13393 1074 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 FAM72AQ5TYM5 149 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 FAM72DQ6L9T8 149 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 MSANTD2Q6P1R3 559 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 C6orf89Q6UWU4 347 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 SPATA31D4Q6ZUB0 917 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 TAOK1Q7L7X3 1001 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 TMC7Q7Z402 723 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 PCGF5Q86SE9 256 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 FAM72BQ86X60 149 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 RIBC1Q8N443 379 aaPredicted RBP9.13□□□□□ -0.95
PHGDH-219ENST00000641513 KLHL23Q8NBE8 558 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 NETO2Q8NC67 525 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 CCNYQ8ND76 341 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 HERVK_113Q902F9 699 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 RAD9AQ99638 391 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 FERMT1Q9BQL6 677 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 ACTR5Q9H9F9 607 aaPredicted RBP9.13□□□□□ -0.95
PHGDH-219ENST00000641513 PRDM16Q9HAZ2 1276 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 ANLNQ9NQW6 1124 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 ENTPD7Q9NQZ7 604 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.13□□□□□ -0.95
PHGDH-219ENST00000641513 ETNK2Q9NVF9 386 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 DNAJC17Q9NVM6 304 aaKnown RBP9.13□□□□□ -0.95
PHGDH-219ENST00000641513 MARCH2Q9P0N8 246 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 STK39Q9UEW8 545 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 OR12D3Q9UGF7 316 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 TPX2Q9ULW0 747 aaKnown RBP9.13□□□□□ -0.95
PHGDH-219ENST00000641513 TLR6Q9Y2C9 796 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 NEU2Q9Y3R4 380 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 YIPF1Q9Y548 306 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 ACTL7BQ9Y614 415 aa9.13□□□□□ -0.95
PHGDH-219ENST00000641513 DOCK6Q96HP0 2047 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 TEX28O15482 410 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 RGS16O15492 202 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 PAGE1O75459 146 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 STK10O94804 968 aaKnown RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 LRIG2O94898 1065 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 ABLIM3O94929 683 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 TBX18O95935 607 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 CSH1P0DML2 217 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 CSH2P0DML3 217 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 SLC2A3P11169 496 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 ERCC2P18074 760 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 IVDP26440 423 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 EPHB2P29323 1055 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 STIP1P31948 543 aaKnown RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 RPL22P35268 128 aaKnown RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 ZNF135P52742 658 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 MAGOHP61326 146 aaKnown RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 BASP1P80723 227 aaKnown RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 SLC10A2Q12908 348 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 XRCC4Q13426 336 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms