RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 PABPC1P11940 636 aaKnown RBP8.19□□□□□ -1.1
PHGDH-217ENST00000641455 POLR2EP19388 210 aaKnown RBP8.19□□□□□ -1.1
PHGDH-217ENST00000641455 TRIM21P19474 475 aaKnown RBP8.19□□□□□ -1.1
PHGDH-217ENST00000641455 CR2P20023 1033 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 HOXD9P28356 352 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-217ENST00000641455 HLA-FP30511 346 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 PSMD8P48556 350 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 PSEN1P49768 467 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 CCR5P51681 352 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 EHHADHQ08426 723 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 CLN3Q13286 438 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 BIRC3Q13489 604 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 CST6Q15828 149 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 LINC00303Q3SY05 128 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 POM121L1PQ3SYA9 428 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 MPPE1Q53F39 396 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 ZNF667Q5HYK9 610 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 PRPF39Q86UA1 669 aaKnown RBP8.19□□□□□ -1.1
PHGDH-217ENST00000641455 MMAAQ8IVH4 418 aaKnown RBP8.19□□□□□ -1.1
PHGDH-217ENST00000641455 AHI1Q8N157 1196 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 CPXM2Q8N436 756 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 MFSD2AQ8NA29 543 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 ELMO3Q96BJ8 720 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 CDK5RAP1Q96SZ6 601 aaKnown RBP8.19□□□□□ -1.1
PHGDH-217ENST00000641455 FGFBP2Q9BYJ0 223 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 RSPH9Q9H1X1 276 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-217ENST00000641455 EVA1BQ9NVM1 165 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 KCNK4Q9NYG8 393 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 HSPBP1Q9NZL4 362 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 PCDHA5Q9Y5H7 936 aa8.19□□□□□ -1.1
PHGDH-217ENST00000641455 UBR5O95071 2799 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-217ENST00000641455 TBC1D3DA0A087WVF3 549 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 TBC1D3IA0A087WXS9 549 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 TBC1D3EA0A087X179 549 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 TBC1D3KA0A087X1G2 549 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 TBC1D3FA6NER0 549 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-217ENST00000641455 TBC1D3LB9A6J9 549 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 PPFIA2O75334 1257 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 GJB6O95452 261 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 TBC1D3HP0C7X1 549 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 SFTPCP11686 197 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 MAT2AP31153 395 aaKnown RBP8.18□□□□□ -1.1
PHGDH-217ENST00000641455 ATICP31939 592 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 SLC8A1P32418 973 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 LONP1P36776 959 aaKnown RBP8.18□□□□□ -1.1
PHGDH-217ENST00000641455 AFMP43652 599 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 DUSP3P51452 185 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-217ENST00000641455 CYP2J2P51589 502 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 ADPRHP54922 357 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 PPP2CBP62714 309 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 PPP2CAP67775 309 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 ASIC1P78348 528 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 STAT4Q14765 748 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 SNRNP35Q16560 246 aaKnown RBP8.18□□□□□ -1.1
PHGDH-217ENST00000641455 ISXQ2M1V0 245 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 ARL13BQ3SXY8 428 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 TBC1D3GQ6DHY5 549 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 TBC1D3CQ6IPX1 549 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 XKR5Q6UX68 686 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 CLEC20AQ6ZU45 233 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 STXBP4Q6ZWJ1 553 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 SND1Q7KZF4 910 aaKnown RBP eCLIP8.18□□□□□ -1.17e-7■□□□□ 8.7
PHGDH-217ENST00000641455 SV2BQ7L1I2 683 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 SCD5Q86SK9 330 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 ADIPOR2Q86V24 386 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 TBC1D3Q8IZP1 549 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-217ENST00000641455 ARL14Q8N4G2 192 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 OR4C6Q8NH72 309 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 SGF29Q96ES7 293 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 ATXN7L3BQ96GX2 97 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 SLC46A1Q96NT5 459 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 SYNDIG1Q9H7V2 258 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 KIAA1586Q9HCI6 787 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 CSNK1G1Q9HCP0 422 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 OLFML3Q9NRN5 406 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 MARCH2Q9P0N8 246 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 FZD4Q9ULV1 537 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 SSUH2Q9Y2M2 353 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 UBE4BO95155 1302 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 CREBBPQ92793 2442 aa8.18□□□□□ -1.1
PHGDH-217ENST00000641455 KIF26BQ2KJY2 2108 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 H3BQV1 296 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 TNFSF15O95150 251 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 STAU1O95793 577 aaKnown RBP8.17□□□□□ -1.1
PHGDH-217ENST00000641455 C7P10643 843 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 CKMT1AP12532 417 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 ITGB6P18564 788 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 DGKAP23743 735 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 HARS2P49590 506 aaKnown RBP8.17□□□□□ -1.1
PHGDH-217ENST00000641455 NDST1P52848 882 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 INHBCP55103 352 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 CYP24A1Q07973 514 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 PDE4CQ08493 712 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 SERINC3Q13530 473 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 PSMD6Q15008 389 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 KMT5BQ4FZB7 885 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 IGF2-ASQ6U949 168 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 ZC3H3Q8IXZ2 948 aaKnown RBP8.17□□□□□ -1.1
PHGDH-217ENST00000641455 SLC25A45Q8N413 288 aa8.17□□□□□ -1.1
PHGDH-217ENST00000641455 C12orf29Q8N999 325 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms