RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 PPM1EQ8WY54 764 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 TSC1Q92574 1164 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 USP13Q92995 863 aaPredicted RBP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 AZIN2Q96A70 460 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 RIPOR3Q96MK2 946 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 CSPG4P5Q96PW8 444 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 RNF157Q96PX1 679 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 DDX50Q9BQ39 737 aaKnown RBP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 HERPUD2Q9BSE4 406 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 CARD6Q9BX69 1037 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 AP1M1Q9BXS5 423 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 L2HGDHQ9H9P8 463 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 TDP1Q9NUW8 608 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 RCOR3Q9P2K3 495 aaPredicted RBP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 AGO1Q9UL18 857 aaKnown RBP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 VANGL2Q9ULK5 521 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 CCL26Q9Y258 94 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 MYO7AQ13402 2215 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 CTAGE15A4D2H0 777 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 ZNF487B1APH4 448 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 E9PAM4 449 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 F5H5T6 163 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 TRDMT1O14717 391 aaKnown RBP9.05□□□□□ -0.96
HLA-B-258ENST00000640615 APOL1O14791 398 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 CTAGE8P0CG41 777 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 ZFXP17010 805 aaPredicted RBP9.05□□□□□ -0.96
HLA-B-258ENST00000640615 TACR2P21452 398 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 EPHB2P29323 1055 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 MTHFRP42898 656 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 HCAR3P49019 387 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 ADCY2Q08462 1091 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 SEMA3BQ13214 749 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 COL19A1Q14993 1142 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 NADSYN1Q6IA69 706 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 FBXL22Q6P050 247 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 RFWD3Q6PCD5 774 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 C1orf228Q6PIY5 440 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 POTEHQ6S545 545 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 HTR3DQ70Z44 454 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 CTAGE6Q86UF2 777 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 VSIG1Q86XK7 387 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 CTAGE4Q8IX94 777 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 LGI2Q8N0V4 545 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 PQLC3Q8N755 202 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 PCDH19Q8TAB3 1148 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 FGF13Q92913 245 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 HAUS1Q96CS2 278 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 FAF2Q96CS3 445 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 TBC1D31Q96DN5 1066 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 MSLNLQ96KJ4 702 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 UHRF1Q96T88 793 aaPredicted RBP9.05□□□□□ -0.96
HLA-B-258ENST00000640615 PRMT1Q99873 361 aaKnown RBP9.05□□□□□ -0.96
HLA-B-258ENST00000640615 CATSPERBQ9H7T0 1116 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 ARHGEF4Q9NR80 690 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 GDE1Q9NZC3 331 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 CD207Q9UJ71 328 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 CDH7Q9ULB5 785 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 EFR3BQ9Y2G0 817 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 ZNF510Q9Y2H8 683 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 ARIH1Q9Y4X5 557 aaPredicted RBP9.05□□□□□ -0.96
HLA-B-258ENST00000640615 ATG2AQ2TAZ0 1938 aa9.05□□□□□ -0.96
HLA-B-258ENST00000640615 MTCL1Q9Y4B5 1905 aaKnown RBP9.05□□□□□ -0.96
HLA-B-258ENST00000640615 GOLGA6L10A0A0M3HER8 536 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 E2F8A0AVK6 867 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 H3BQ06 376 aaPredicted RBP9.04□□□□□ -0.96
HLA-B-258ENST00000640615 RIOK3O14730 519 aaKnown RBP9.04□□□□□ -0.96
HLA-B-258ENST00000640615 GREM1O60565 184 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 TSPAN3O60637 253 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 PRAMEF12O95522 483 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 LATS1O95835 1130 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 ERCC2P18074 760 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 SLC6A4P31645 630 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 GBP2P32456 591 aaPredicted RBP9.04□□□□□ -0.96
HLA-B-258ENST00000640615 HTR7P34969 479 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 VIPR2P41587 438 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 NRG1Q02297 640 aaPredicted RBP9.04□□□□□ -0.96
HLA-B-258ENST00000640615 C2orf54Q08AI8 447 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 KLF1Q13351 362 aaPredicted RBP9.04□□□□□ -0.96
HLA-B-258ENST00000640615 DPYSQ14117 519 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 FAM133BQ5BKY9 247 aaKnown RBP9.04□□□□□ -0.96
HLA-B-258ENST00000640615 FAM78AQ5JUQ0 283 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 ADGRF1Q5T601 910 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 MANEALQ5VSG8 457 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 SLC9A4Q6AI14 798 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 Q6ZNB5 142 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 BBS12Q6ZW61 710 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 BBS7Q8IWZ6 715 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 ZNF683Q8IZ20 524 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 ZDHHC14Q8IZN3 488 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 CFAP52Q8N1V2 620 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 CELF5Q8N6W0 485 aaKnown RBP9.04□□□□□ -0.96
HLA-B-258ENST00000640615 PLD5Q8N7P1 536 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 SPATA4Q8NEY3 305 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 C1orf54Q8WWF1 131 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 SMARCD2Q92925 531 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 IGSF8Q969P0 613 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 RPRD1AQ96P16 312 aaPredicted RBP9.04□□□□□ -0.96
HLA-B-258ENST00000640615 MYADMQ96S97 322 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 FAM118BQ9BPY3 351 aa9.04□□□□□ -0.96
HLA-B-258ENST00000640615 ZYG11BQ9C0D3 744 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms