RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 POU5F1Q01860 360 aaKnown RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 GRTP1Q5TC63 336 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 RGS9BPQ6ZS82 235 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 IFNL1Q8IU54 200 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 EPS8L1Q8TE68 723 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 MFSD14AQ96MC6 490 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 SH3GL1Q99961 368 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 ST6GALNAC4Q9H4F1 302 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 ZBTB22O15209 634 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 PJA2O43164 708 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 FKBP9O95302 570 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 INHAP05111 366 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 PRIM2P49643 509 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 FOXD4Q12950 439 aaPredicted RBP11.28□□□□□ -0.6
SCN1B-208ENST00000640135 CHI3L2Q15782 390 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 FKBP9P1Q75LS8 142 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 MTSS1LQ765P7 747 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 GLT6D1Q7Z4J2 308 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 BBS7Q8IWZ6 715 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 FAM71AQ8IYT1 594 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 ARMC2Q8NEN0 867 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 CXorf40AQ8TE69 158 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 SHC3Q92529 594 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 ELOVL6Q9H5J4 265 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 ATP13A3Q9H7F0 1226 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 NMRAL1Q9HBL8 299 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 ZMYM5Q9UJ78 669 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 VAV3Q9UKW4 847 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 PADI3Q9ULW8 664 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 SOX13Q9UN79 622 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 HES2Q9Y543 173 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 A0A0B4J269 797 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 FAM47E-STBD1D6RA91 191 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 DDX3XO00571 662 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCN1B-208ENST00000640135 SYN3O14994 580 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 SOAT1P35610 550 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 MARSP56192 900 aaKnown RBP11.28□□□□□ -0.6
SCN1B-208ENST00000640135 TUBGCP3Q96CW5 907 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 PLEKHA8Q96JA3 519 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 C6orf203Q9P0P8 240 aaPredicted RBP11.28□□□□□ -0.6
SCN1B-208ENST00000640135 KLRG2A4D1S0 409 aaPredicted RBP11.28□□□□□ -0.6
SCN1B-208ENST00000640135 F8VP50 259 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 F8W810 466 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 O00370 1275 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 MAP3K6O95382 1288 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 IFNA14P01570 189 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 GPC1P35052 558 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 NAA20P61599 178 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 ENPEPQ07075 957 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 MAD2L1Q13257 205 aaPredicted RBP11.28□□□□□ -0.6
SCN1B-208ENST00000640135 WDR93Q6P2C0 686 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 PSRC1Q6PGN9 363 aaPredicted RBP11.28□□□□□ -0.6
SCN1B-208ENST00000640135 SERPINA13PQ6UXR4 307 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 PIK3R5Q8WYR1 880 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 DUSP16Q9BY84 665 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 ACTR8Q9H981 624 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 RGS18Q9NS28 235 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 MGAT4DA6NG13 374 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 TMEM114B3SHH9 223 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 RNF103O00237 685 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 OPLAHO14841 1288 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 LGR5O75473 907 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 KCNT2Q6UVM3 1135 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 PHF13Q86YI8 300 aaPredicted RBP11.28□□□□□ -0.6
SCN1B-208ENST00000640135 ICA1LQ8NDH6 482 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 CASP10Q92851 521 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 FAXDC2Q96IV6 333 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 PURBQ96QR8 312 aaKnown RBP11.28□□□□□ -0.6
SCN1B-208ENST00000640135 PNKPQ96T60 521 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 TBL1YQ9BQ87 522 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 APOL2Q9BQE5 337 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 NPHS2Q9NP85 383 aa11.28□□□□□ -0.6
SCN1B-208ENST00000640135 ASTN1O14525 1302 aa11.27□□□□□ -0.6
SCN1B-208ENST00000640135 DNALI1O14645 258 aaPredicted RBP11.27□□□□□ -0.6
SCN1B-208ENST00000640135 MLNP12872 115 aa11.27□□□□□ -0.6
SCN1B-208ENST00000640135 CTSEP14091 401 aa11.27□□□□□ -0.6
SCN1B-208ENST00000640135 PSMA3P25788 255 aa11.27□□□□□ -0.6
SCN1B-208ENST00000640135 EEF1DP29692 281 aaKnown RBP11.27□□□□□ -0.6
SCN1B-208ENST00000640135 OR1D2P34982 312 aa11.27□□□□□ -0.6
SCN1B-208ENST00000640135 SMAD3P84022 425 aaKnown RBP11.27□□□□□ -0.6
SCN1B-208ENST00000640135 DDX39BQ13838 428 aaKnown RBP11.27□□□□□ -0.6
SCN1B-208ENST00000640135 ZC3H12BQ5HYM0 836 aaKnown RBP11.27□□□□□ -0.6
SCN1B-208ENST00000640135 NPAS4Q8IUM7 802 aa11.27□□□□□ -0.6
SCN1B-208ENST00000640135 ASB2Q96Q27 587 aa11.27□□□□□ -0.6
SCN1B-208ENST00000640135 LACRTQ9GZZ8 138 aa11.27□□□□□ -0.6
SCN1B-208ENST00000640135 KRCC1Q9NPI7 259 aaPredicted RBP11.27□□□□□ -0.6
SCN1B-208ENST00000640135 APPL1Q9UKG1 709 aa11.27□□□□□ -0.6
SCN1B-208ENST00000640135 MAFBQ9Y5Q3 323 aaPredicted RBP11.27□□□□□ -0.6
SCN1B-208ENST00000640135 A0A087X0B3 334 aa11.27□□□□□ -0.61
SCN1B-208ENST00000640135 A0A1W2PQ67 120 aa11.27□□□□□ -0.61
SCN1B-208ENST00000640135 KIF1CO43896 1103 aaKnown RBP11.27□□□□□ -0.61
SCN1B-208ENST00000640135 CATP04040 527 aaKnown RBP11.27□□□□□ -0.61
SCN1B-208ENST00000640135 ADRB2P07550 413 aa11.27□□□□□ -0.61
SCN1B-208ENST00000640135 MEA1Q16626 185 aa11.27□□□□□ -0.61
SCN1B-208ENST00000640135 C9orf57Q5W0N0 161 aa11.27□□□□□ -0.61
SCN1B-208ENST00000640135 EEF1DP3Q658K8 133 aa11.27□□□□□ -0.61
SCN1B-208ENST00000640135 RGL4Q8IZJ4 473 aa11.27□□□□□ -0.61
SCN1B-208ENST00000640135 USP20Q9Y2K6 914 aa11.27□□□□□ -0.61
SCN1B-208ENST00000640135 KANSL1LA0AUZ9 987 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms