RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 NOCTQ9UK39 431 aaKnown RBP18.35■□□□□ 0.53
PTPN11-207ENST00000639857 CDV3Q9UKY7 258 aaKnown RBP18.35■□□□□ 0.53
PTPN11-207ENST00000639857 STAP1Q9ULZ2 295 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 GOLGA6L7A0A1B0GV03 622 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 MOCS2O96007 188 aaPredicted RBP18.34■□□□□ 0.53
PTPN11-207ENST00000639857 ATP5BP06576 529 aaKnown RBP18.34■□□□□ 0.53
PTPN11-207ENST00000639857 C7P10643 843 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 ABCB4P21439 1286 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 LIMK1P53667 647 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 NOMO3P69849 1222 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 CDR2Q01850 454 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 SYCP1Q15431 976 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 RSPO4Q2I0M5 234 aaPredicted RBP18.34■□□□□ 0.53
PTPN11-207ENST00000639857 SERPINA13PQ6UXR4 307 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 TRIM72Q6ZMU5 477 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 CHST9Q7L1S5 443 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 ARCQ7LC44 396 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 APTXQ7Z2E3 356 aaKnown RBP18.34■□□□□ 0.53
PTPN11-207ENST00000639857 ERICH1Q86X53 443 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 C12orf50Q8NA57 414 aaPredicted RBP18.34■□□□□ 0.53
PTPN11-207ENST00000639857 NEK11Q8NG66 645 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 SPAG5Q96R06 1193 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 RTKNQ9BST9 563 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 PLA2G4CQ9UP65 541 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 RAD54BQ9Y620 910 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.34■□□□□ 0.53
PTPN11-207ENST00000639857 PI4KAP42356 2102 aa18.34■□□□□ 0.53
PTPN11-207ENST00000639857 WASH3PC4AMC7 463 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 F5H5T6 163 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 MAP3K13O43283 966 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 AP5Z1O43299 807 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 SYNCRIPO60506 623 aaKnown RBP18.33■□□□□ 0.52
PTPN11-207ENST00000639857 LUC7L3O95232 432 aaKnown RBP18.33■□□□□ 0.52
PTPN11-207ENST00000639857 DLDP09622 509 aaKnown RBP18.33■□□□□ 0.52
PTPN11-207ENST00000639857 TACR2P21452 398 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 HOXD12P35452 270 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 STAT1P42224 750 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 KLK7P49862 253 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 RPS24P62847 133 aaKnown RBP18.33■□□□□ 0.52
PTPN11-207ENST00000639857 PITX1P78337 314 aaPredicted RBP18.33■□□□□ 0.52
PTPN11-207ENST00000639857 CREB5Q02930 508 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 UBXN1Q04323 297 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 CDH18Q13634 790 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 FUT11Q495W5 492 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 ANO6Q4KMQ2 910 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 ACBD5Q5T8D3 534 aaPredicted RBP18.33■□□□□ 0.52
PTPN11-207ENST00000639857 TAF3Q5VWG9 929 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 CYP2U1Q7Z449 544 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 CHSY1Q86X52 802 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 AOPEPQ8N6M6 819 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 RLN3Q8WXF3 142 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 NT5C3BQ969T7 300 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 PGAP3Q96FM1 320 aaPredicted RBP18.33■□□□□ 0.52
PTPN11-207ENST00000639857 LMLNQ96KR4 655 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 TMEM245Q9H330 911 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 MBD1Q9UIS9 605 aaPredicted RBP18.33■□□□□ 0.52
PTPN11-207ENST00000639857 INVSQ9Y283 1065 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 PAXBP1Q9Y5B6 917 aa18.33■□□□□ 0.52
PTPN11-207ENST00000639857 SMTNL1A8MU46 457 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 EPHB6O15197 1021 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 GRAP2O75791 330 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 GFPT2O94808 682 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 CAVIN2O95810 425 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 F9P00740 461 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 ASLP04424 464 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 MMEP08473 750 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 POLR2EP19388 210 aaKnown RBP18.32■□□□□ 0.52
PTPN11-207ENST00000639857 PRKCHP24723 683 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 CAMK2GQ13555 558 aaPredicted RBP18.32■□□□□ 0.52
PTPN11-207ENST00000639857 MBLAC2Q68D91 279 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 CAVIN1Q6NZI2 390 aaKnown RBP18.32■□□□□ 0.52
PTPN11-207ENST00000639857 XYLT1Q86Y38 959 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 LGI2Q8N0V4 545 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 KDM1BQ8NB78 822 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 WFDC5Q8TCV5 224 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 TTC17Q96AE7 1141 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 NPY6RQ99463 290 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 PRMT1Q99873 361 aaKnown RBP18.32■□□□□ 0.52
PTPN11-207ENST00000639857 PRDM16Q9HAZ2 1276 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 NLRC4Q9NPP4 1024 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.32■□□□□ 0.52
PTPN11-207ENST00000639857 XPO7Q9UIA9 1087 aaKnown RBP18.32■□□□□ 0.52
PTPN11-207ENST00000639857 CACNA1AO00555 2505 aa18.32■□□□□ 0.52
PTPN11-207ENST00000639857 DOCK4Q8N1I0 1966 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 IGHV1OR15-9A0A0B4J2B8 117 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 M0QYT0 321 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 SLC30A4O14863 429 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 MOCS3O95396 460 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 CYP1A1P04798 512 aaPredicted RBP18.31■□□□□ 0.52
PTPN11-207ENST00000639857 PTMSP20962 102 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 CD70P32970 193 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 DHPSP49366 369 aaPredicted RBP18.31■□□□□ 0.52
PTPN11-207ENST00000639857 OXCT1P55809 520 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 SLC12A1Q13621 1099 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 PTPRNQ16849 979 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 KLHL40Q2TBA0 621 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 AASDHQ4L235 1098 aaPredicted RBP18.31■□□□□ 0.52
PTPN11-207ENST00000639857 FNDC3BQ53EP0 1204 aaKnown RBP18.31■□□□□ 0.52
PTPN11-207ENST00000639857 BRMS1LQ5PSV4 323 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 RABGAP1LQ5R372 815 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms