RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 PRDM12Q9H4Q4 367 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 ARHGAP28Q9P2N2 729 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 MED1Q15648 1581 aaPredicted RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 NALCNQ8IZF0 1738 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 MYO1GB0I1T2 1018 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 STX7O15400 261 aaKnown RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 ZNF862O60290 1169 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 CDKN2BP42772 138 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 CERS2Q96G23 380 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 DDX18Q9NVP1 670 aaKnown RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 GPRC5DQ9NZD1 345 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 ABT1Q9ULW3 272 aaKnown RBP17.03■□□□□ 0.32
SCARB2-210ENST00000638567 RNF112Q9ULX5 631 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 SLC8A2Q9UPR5 921 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 SORCS3Q9UPU3 1222 aa17.03■□□□□ 0.32
SCARB2-210ENST00000638567 LYPLA1O75608 230 aaPredicted RBP17.02■□□□□ 0.32
SCARB2-210ENST00000638567 THP07101 528 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 ADSSP30520 456 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 ANKRD22Q5VYY1 191 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 EFL1Q7Z2Z2 1120 aaKnown RBP17.02■□□□□ 0.32
SCARB2-210ENST00000638567 GTF3C2Q8WUA4 911 aaPredicted RBP17.02■□□□□ 0.32
SCARB2-210ENST00000638567 MUC3BQ9H195 1237 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 SNED1Q8TER0 1413 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 ERI2A8K979 691 aaKnown RBP17.02■□□□□ 0.32
SCARB2-210ENST00000638567 PRR5-ARHGAP8B1AHC4 643 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 GSC2O15499 205 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 FAM155BO75949 473 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 ARHGAP8P85298 464 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 NFYCQ13952 458 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 ADRM1Q16186 407 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 CYP1B1Q16678 543 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 GALNTL6Q49A17 601 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 TIGD7Q6NT04 549 aaPredicted RBP17.02■□□□□ 0.32
SCARB2-210ENST00000638567 CATSPERGQ6ZRH7 1159 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 NET1Q7Z628 596 aaPredicted RBP17.02■□□□□ 0.32
SCARB2-210ENST00000638567 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCARB2-210ENST00000638567 MAGEC3Q8TD91 643 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 FAM162AQ96A26 154 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 DACH2Q96NX9 599 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 LGALS13Q9UHV8 139 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 ZNF229Q9UJW7 825 aa17.02■□□□□ 0.32
SCARB2-210ENST00000638567 C17orf102A2RUQ5 167 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 CASTOR2A6NHX0 329 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 H0Y626 953 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 RECQL4O94761 1208 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 TRIM16O95361 564 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 ANPEPP15144 967 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 NPY2RP49146 381 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 DAB2P98082 770 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 TNS4Q8IZW8 715 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 PRPF18Q99633 342 aaKnown RBP17.02■□□□□ 0.31
SCARB2-210ENST00000638567 GPR63Q9BZJ6 419 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 TRPC7Q9HCX4 862 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 NMRK1Q9NWW6 199 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 PCDHGB4Q9UN71 923 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 RPL26L1Q9UNX3 145 aaKnown RBP17.02■□□□□ 0.31
SCARB2-210ENST00000638567 KCPQ6ZWJ8 1503 aa17.02■□□□□ 0.31
SCARB2-210ENST00000638567 CLASP2O75122 1294 aaKnown RBP17.01■□□□□ 0.31
SCARB2-210ENST00000638567 MYO1DO94832 1006 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 FKBP9O95302 570 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 ABHD15Q6UXT9 468 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 FKBP9P1Q75LS8 142 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 ULK2Q8IYT8 1036 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 SH3TC2Q8TF17 1288 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 DNAJB3Q8WWF6 145 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 TRMT6Q9UJA5 497 aaKnown RBP17.01■□□□□ 0.31
SCARB2-210ENST00000638567 TRHDEQ9UKU6 1024 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 SMNDC1O75940 238 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCARB2-210ENST00000638567 BAIAP3O94812 1187 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 HIST1H2AGP0C0S8 130 aaPredicted RBP17.01■□□□□ 0.31
SCARB2-210ENST00000638567 CETPP11597 493 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 HIST1H2ADP20671 130 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 LHX1P48742 406 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 RGS4P49798 205 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 PTP4A2Q12974 167 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 FNBP1LQ5T0N5 605 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 VSTM1Q6UX27 236 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 ARCQ7LC44 396 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 NT5DC4Q86YG4 428 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 RNF217Q8TC41 542 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 SLC44A1Q8WWI5 657 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 HIST1H2AHQ96KK5 128 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 HIST1H2AJQ99878 128 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 H2AFJQ9BTM1 129 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 ULBP1Q9BZM6 244 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 UTP6Q9NYH9 597 aaKnown RBP17.01■□□□□ 0.31
SCARB2-210ENST00000638567 VTI1BQ9UEU0 232 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 MYH10P35580 1976 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 DUOX1Q9NRD9 1551 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 ERBB2P04626 1255 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 SLC2A3P11169 496 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 GOT1P17174 413 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 CCR1P32246 355 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 HOXD13P35453 343 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 FASTKQ14296 549 aaKnown RBP17.01■□□□□ 0.31
SCARB2-210ENST00000638567 TBCELQ5QJ74 424 aa17.01■□□□□ 0.31
SCARB2-210ENST00000638567 RNASEH2BQ5TBB1 312 aaKnown RBP17.01■□□□□ 0.31
SCARB2-210ENST00000638567 PCDH20Q8N6Y1 951 aaKnown RBP17.01■□□□□ 0.31
SCARB2-210ENST00000638567 DENND2DQ9H6A0 471 aaPredicted RBP17.01■□□□□ 0.31
SCARB2-210ENST00000638567 CCDC15Q0P6D6 951 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms