RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 LPIN3Q9BQK8 851 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 FDXACB1Q9BRP7 624 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 C11orf84Q9BUA3 381 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 NFKBIZQ9BYH8 718 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 KLHL4Q9C0H6 718 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 IL1RAPL1Q9NZN1 696 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 COPG2Q9UBF2 871 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 MORF4L1Q9UBU8 362 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 LOC100653049A0A140TA62 436 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 HBP1O60381 514 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 KRT34O76011 436 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 C22orf31O95567 290 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 STAU1O95793 577 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 SETSIPP0DME0 302 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 RALBP11234 206 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 UQCRBP14927 111 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 ARF4P18085 180 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 PGAM1P18669 254 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 NCF2P19878 526 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 PEX2P28328 305 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 FDFT1P37268 417 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 HARS2P49590 506 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 AQP4P55087 323 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 RASIP1Q5U651 963 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 FRMD7Q6ZUT3 714 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 DEFB107AQ8IZN7 70 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 ARHGAP18Q8N392 663 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 HIPK4Q8NE63 616 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 AFG1LQ8WV93 481 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 CENPIQ92674 756 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 LGMNQ99538 433 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 SPATA16Q9BXB7 569 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 SPATC1LQ9H0A9 340 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 RNPEPQ9H4A4 650 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 SMARCAD1Q9H4L7 1026 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 FAM96AQ9H5X1 160 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 ZNF358Q9NW07 568 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 POMPQ9Y244 141 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 TBC1D30Q9Y2I9 924 aa10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 SF3B1O75533 1304 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMARCA2-265ENST00000638139 E2F8A0AVK6 867 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 ZMPSTE24O75844 475 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 RTN3O95197 1032 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 PGK2P07205 417 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 MYL4P12829 197 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 GOT1P17174 413 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 DEUP1Q05D60 604 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 MED21Q13503 144 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 CUL3Q13618 768 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 ITGA9Q13797 1035 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 INSCQ1MX18 579 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 NOL9Q5SY16 702 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 HPS6Q86YV9 775 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 ST13P4Q8IZP2 240 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 PYROXD2Q8N2H3 581 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 NETO2Q8NC67 525 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 JADE3Q92613 823 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 CMTM5Q96DZ9 223 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 OLFM3Q96PB7 478 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 FAM124BQ9H5Z6 455 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 SYBUQ9NX95 663 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 ETAA1Q9NY74 926 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 GTF2IRD1Q9UHL9 959 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 PLXNA1Q9UIW2 1896 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 NFKBIEO00221 500 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 ERVK-10P10266 1014 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 PIM1P11309 404 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 TYK2P29597 1187 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 NAB1Q13506 487 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 SOWAHAQ2M3V2 549 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 TCHHL1Q5QJ38 904 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 BSPRYQ5W0U4 402 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 CES3Q6UWW8 571 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.33□□□□□ -0.764e-6■■■■□ 24.4
SMARCA2-265ENST00000638139 NCSTNQ92542 709 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 KIF12Q96FN5 646 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 CENPKQ9BS16 269 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 OXCT2Q9BYC2 517 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 CEP41Q9BYV8 373 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 CXCL16Q9H2A7 254 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 VCX3BQ9H321 246 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 GGA3Q9NZ52 723 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 PIM2Q9P1W9 311 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 USP3Q9Y6I4 520 aa10.33□□□□□ -0.76
SMARCA2-265ENST00000638139 H3BNX3 289 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 PPEF2O14830 753 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 DCXO43602 365 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 ZBTB14O43829 449 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 COX4I1P13073 169 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 CPA3P15088 417 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 RAG1P15918 1043 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 VCLP18206 1134 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 SERPINB6P35237 376 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 MLH1P40692 756 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 SLC26A2P50443 739 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 XIAPP98170 497 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 EN1Q05925 392 aaPredicted RBP10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 TBL3Q12788 808 aaKnown RBP10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 DLG1Q12959 904 aa10.32□□□□□ -0.76
SMARCA2-265ENST00000638139 USP4Q13107 963 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms