RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 TAF6P49848 677 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 ZNF697Q5TEC3 545 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 EDEM1Q92611 657 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 RIBC2Q9H4K1 309 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 PDGFCQ9NRA1 345 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 TNFRSF21O75509 655 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 RASGRP1O95267 797 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 COPZ1P61923 177 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 CARTPTQ16568 116 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 PTGISQ16647 500 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 TMEM159Q96B96 161 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 CDY2AQ9Y6F7 541 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 CDY1Q9Y6F8 540 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 SAMD9LQ8IVG5 1584 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 ZNF432O94892 652 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 SEPT1Q8WYJ6 367 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 MAT2BQ9NZL9 334 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 ROBO2Q9HCK4 1378 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 NR6A1Q15406 480 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 C4orf46Q504U0 113 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 C2CD6Q53TS8 623 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 PACS2Q86VP3 889 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 SUSD6Q92537 303 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 CELF4Q9BZC1 486 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 ABHD14A-ACY1A0A1B0GW23 586 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 PRG2P13727 222 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 OR1E1P30953 314 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 LNX2Q8N448 690 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 TMEM79Q9BSE2 394 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 ALDH8A1Q9H2A2 487 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 DSN1Q9H410 356 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 WARSP23381 471 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 LPCAT2Q7L5N7 544 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 CEP41Q9BYV8 373 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 ACTR8Q9H981 624 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 RIMKLBQ9ULI2 386 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 ITPKBP27987 946 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 RPL4P36578 427 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 GTF3C2Q8WUA4 911 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 CATSPER2Q96P56 530 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 KCNJ1P48048 391 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 SLC18A3Q16572 532 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 ELMO1Q92556 727 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 CORO1BQ9BR76 489 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 VPS9D1Q9Y2B5 631 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 IGSF9BQ9UPX0 1349 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 USP27XA6NNY8 438 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 MPOP05164 745 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 PDIA5Q14554 519 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 ATP13A4Q4VNC1 1196 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 SLC20A1Q8WUM9 679 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 ZNF232Q9UNY5 417 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 ARHGAP31Q2M1Z3 1444 aa16.67■□□□□ 0.26
CACNA1A-258ENST00000638029 EIF3HO15372 352 aaKnown RBP eCLIP16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 SEPT4O43236 478 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 CCNB2O95067 398 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 PTPN3P26045 913 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 BNC1Q01954 994 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 TCHHL1Q5QJ38 904 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 LRRC1Q9BTT6 524 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 NOD2Q9HC29 1040 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 DPP7Q9UHL4 492 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 A0A1W2PQC6 194 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 KLHL41O60662 606 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 SCN2BO60939 215 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 RFC5P40937 340 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 MRNIPQ6NTE8 343 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 NEK5Q6P3R8 708 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 ARHGAP22Q7Z5H3 698 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 C8orf4Q9NR00 106 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 RNF19AQ9NV58 838 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 ANXA5P08758 320 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 UQCRBP14927 111 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 GPC6Q9Y625 555 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 MYL12BO14950 172 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 KCNQ2O43526 872 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 EXTL3O43909 919 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 ITIH2P19823 946 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 GNA13Q14344 377 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 PLA2G4EQ3MJ16 856 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 TRAPPC11Q7Z392 1133 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 CXorf40AQ8TE69 158 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 MAML3Q96JK9 1138 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 FAM111AQ96PZ2 611 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 CEP44Q9C0F1 390 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 FLT1P17948 1338 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 CYP2A7P20853 494 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 IGFALSP35858 605 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 VPS45Q9NRW7 570 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 KIAA1257Q9ULG3 409 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 NINQ8N4C6 2090 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 RSAD1Q9HA92 442 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 GRID1Q9ULK0 1009 aa16.66■□□□□ 0.26
CACNA1A-258ENST00000638029 KCNH1O95259 989 aa16.65■□□□□ 0.26
CACNA1A-258ENST00000638029 SLC45A4Q5BKX6 768 aa16.65■□□□□ 0.26
CACNA1A-258ENST00000638029 ADGRG2Q8IZP9 1017 aa16.65■□□□□ 0.26
CACNA1A-258ENST00000638029 TMEM8AQ9HCN3 771 aa16.65■□□□□ 0.26
CACNA1A-258ENST00000638029 PCDHA11Q9Y5I1 949 aa16.65■□□□□ 0.26
CACNA1A-258ENST00000638029 NOS1APO75052 506 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-258ENST00000638029 XYLBO75191 536 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms