RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 B3GNTL1Q67FW5 361 aaPredicted RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 C11orf88Q6PI97 169 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 IL27RAQ6UWB1 636 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 ANGPTL8Q6UXH0 198 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 CATSPERGQ6ZRH7 1159 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC186Q7Z3E2 898 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 GDF7Q7Z4P5 450 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 LRRTM4Q86VH4 590 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 LRRC49Q8IUZ0 686 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 NUP93Q8N1F7 819 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 LRRC43Q8N309 656 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 TSPYL6Q8N831 410 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 USP38Q8NB14 1042 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 ATP11CQ8NB49 1132 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 FAM46DQ8NEK8 389 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC148Q8NFR7 591 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 CTCFLQ8NI51 663 aaPredicted RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 SUN5Q8TC36 379 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 ZFAND2BQ8WV99 257 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 CTNNBL1Q8WYA6 563 aaPredicted RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 RUBCNQ92622 972 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 NSUN4Q96CB9 384 aaKnown RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 C16orf45Q96MC5 204 aaPredicted RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 TIGD1Q96MW7 591 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 MED15Q96RN5 788 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 CRACR2AQ9BSW2 395 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 FSD1Q9BTV5 496 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 SLC46A2Q9BY10 475 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 TEX101Q9BY14 249 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 DNAI2Q9GZS0 605 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 OR10A4Q9H209 315 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 CHST8Q9H2A9 424 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 MROH8Q9H579 483 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 SERHLQ9NQF3 203 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 XPNPEP3Q9NQH7 507 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 TMEM74BQ9NUR3 256 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 TBCCD1Q9NVR7 557 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 RASAL2Q9UJF2 1139 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 USP15Q9Y4E8 981 aaPredicted RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 A0A087WZ62 844 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC195A0A1B0GUA6 201 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 A0A1W2PS29 197 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 GAGE12BA1L429 117 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 GAGE12HA6NDE8 117 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC169A6NNP5 214 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 UBXN8O00124 270 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 APOL1O14791 398 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 FFAR2O15552 330 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ASAP2O43150 1006 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 IRAK2O43187 625 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 TXNL1O43396 289 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 KCNQ3O43525 872 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 STX6O43752 255 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 FMO6PO60774 539 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 TSC22D2O75157 780 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SOAT2O75908 522 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 STAMBPO95630 424 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 A1BGP04217 495 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CLTBP09497 229 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CYP2A6P11509 494 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CYP2C9P11712 490 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 NR4A1P22736 598 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ALDH1B1P30837 517 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 HOXA11P31270 313 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 PSMC4P43686 418 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CARSP49589 748 aaKnown RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 TKTL1P51854 596 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 RBM5P52756 815 aaKnown RBP eCLIP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ARFIP1P53367 373 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SLC26A5P58743 744 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 RBM6P78332 1123 aaKnown RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 IFI35P80217 286 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 FAM189BP81408 668 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 MXRA7P84157 204 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 PPARDQ03181 441 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 GBE1Q04446 702 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 TLE2Q04725 743 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 PIGFQ07326 219 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 GALNT1Q10472 559 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 FOXO1Q12778 655 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SGCGQ13326 291 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SLC14A1Q13336 389 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 PMS2P11Q13670 270 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ERV3-1Q14264 604 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SYCP1Q15431 976 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 PPP1R7Q15435 360 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 FAM110CQ1W6H9 321 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 MPEG1Q2M385 716 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SUPT20HL1Q3ZLR7 823 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SLC44A4Q53GD3 710 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 FBXO47Q5MNV8 452 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 TTC39AQ5SRH9 613 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 KLHDC7AQ5VTJ3 777 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 AP1ARQ63HQ0 302 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 TPGS2Q68CL5 300 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 HAUS3Q68CZ6 603 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 TAPT1Q6NXT6 567 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 TAF2Q6P1X5 1199 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 WDR73Q6P4I2 378 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ZDHHC24Q6UX98 284 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms