RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 TRIM63Q969Q1 353 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 GDF15Q99988 308 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 TAOK3Q9H2K8 898 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 TAF1DQ9H5J8 278 aaPredicted RBP2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 SLAMF7Q9NQ25 335 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 TM7SF3Q9NS93 570 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 TBC1D30Q9Y2I9 924 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 GPR52Q9Y2T5 361 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 UBN2Q6ZU65 1347 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 ARAP2Q8WZ64 1704 aa2.88□□□□□ -1.95
SMARCB1-208ENST00000634926 H0YIN7 160 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 KIAA0391O15091 583 aaKnown RBP2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 NPC1O15118 1278 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 MPPED1O15442 326 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 ERN1O75460 977 aaKnown RBP2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 DNAJB5O75953 348 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 DDNO94850 711 aaPredicted RBP2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 UNC5CO95185 931 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 STARD3NLO95772 234 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 CHEK2O96017 543 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 POMCP01189 267 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 A1BGP04217 495 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 TXNP10599 105 aaKnown RBP2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 HSPA8P11142 646 aaKnown RBP2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 MYL4P12829 197 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 IL1R1P14778 569 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 GATA3P23771 443 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC11A2P49281 568 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 CARSP49589 748 aaKnown RBP2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 GALNT1Q10472 559 aaPredicted RBP2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 TCF15Q12870 199 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 PPFIA1Q13136 1202 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 PFKFB4Q16877 469 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 MIDNQ504T8 468 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 NOMO2Q5JPE7 1267 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 OLFM4Q6UX06 510 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 C16orf71Q8IYS4 520 aaPredicted RBP2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC30A5Q8TAD4 765 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 DENND1AQ8TEH3 1009 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 TRAPPC12Q8WVT3 735 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 IPCEF1Q8WWN9 437 aaPredicted RBP2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 TBC1D20Q96BZ9 403 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 GCC1Q96CN9 775 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 MASTLQ96GX5 879 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 TBATAQ96M53 351 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 PLEKHF1Q96S99 279 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 RMDN3Q96TC7 470 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 TMEM120AQ9BXJ8 343 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 TEX13AQ9BXU3 409 aaPredicted RBP2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 SIK2Q9H0K1 926 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 CHST8Q9H2A9 424 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 EBF3Q9H4W6 596 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 GSTO2Q9H4Y5 243 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 NECTIN3Q9NQS3 549 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 GJB4Q9NTQ9 266 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 SAGE1Q9NXZ1 904 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC39A10Q9ULF5 831 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 LZTS1Q9Y250 596 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 MAN2B2Q9Y2E5 1009 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 MTO1Q9Y2Z2 717 aaKnown RBP2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 KNSTRNQ9Y448 316 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 USP16Q9Y5T5 823 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 MYH3P11055 1940 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 CDHR2Q9BYE9 1310 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 XIRP2A4UGR9 3374 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 OTOFQ9HC10 1997 aa2.87□□□□□ -1.95
SMARCB1-208ENST00000634926 ECM29Q5VYK3 1845 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 REV3LO60673 3130 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 TRGV11A0A075B6L2 103 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 IGKV2D-30A0A075B6S6 120 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF785A8K8V0 405 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 MYO1CO00159 1063 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 SYT5O00445 386 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 PROM1O43490 865 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 HTATSF1O43719 755 aaKnown RBP2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 INMTO95050 263 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 NTSR2O95665 410 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 GRPP07492 148 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 DHRS4L1P0CG22 281 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 PIM1P11309 404 aaPredicted RBP2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 CYP2C9P11712 490 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 XRCC6P12956 609 aaKnown RBP eCLIP2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 IL1R2P27930 398 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 PRKAR2BP31323 418 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 POLGP54098 1239 aaPredicted RBP2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 UCP3P55916 312 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 ARL4CP56559 192 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 WNT3P56703 355 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 PSMC1P62191 440 aaKnown RBP2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 SLFN5Q08AF3 891 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 PTK2BQ14289 1009 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 SPARCL1Q14515 664 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 HLFQ16534 295 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 UTP14CQ5TAP6 766 aaKnown RBP2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 CST9Q5W186 159 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 ATG9BQ674R7 924 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC18B1Q6NT16 456 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 USP17L6PQ6QN14 398 aa2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.86□□□□□ -1.95
SMARCB1-208ENST00000634926 MMS22LQ6ZRQ5 1243 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms