RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 GGA2Q9UJY4 613 aa16.26■□□□□ 0.19
LINC00339-207ENST00000634712 INVSQ9Y283 1065 aa16.26■□□□□ 0.19
LINC00339-207ENST00000634712 STON1Q9Y6Q2 735 aa16.26■□□□□ 0.19
LINC00339-207ENST00000634712 EP300Q09472 2414 aaPredicted RBP16.25■□□□□ 0.19
LINC00339-207ENST00000634712 A0A1W2PQC6 194 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 WASH3PC4AMC7 463 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 H0Y626 953 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 SYNCRIPO60506 623 aaKnown RBP16.25■□□□□ 0.19
LINC00339-207ENST00000634712 ATP5BP06576 529 aaKnown RBP16.25■□□□□ 0.19
LINC00339-207ENST00000634712 POLR2EP19388 210 aaKnown RBP16.25■□□□□ 0.19
LINC00339-207ENST00000634712 MMP8P22894 467 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 DEUP1Q05D60 604 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 EIF4EBP2Q13542 120 aaPredicted RBP16.25■□□□□ 0.19
LINC00339-207ENST00000634712 RABGAP1LQ5R372 815 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 KBTBD6Q86V97 674 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 KIAA2013Q8IYS2 634 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 FIBINQ8TAL6 211 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 ERLEC1Q96DZ1 483 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 NPY6RQ99463 290 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 C11orf70Q9BRQ4 267 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 MYO6Q9UM54 1294 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 RAD54BQ9Y620 910 aa16.25■□□□□ 0.19
LINC00339-207ENST00000634712 DCLK1O15075 740 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 MAP3K13O43283 966 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 MOCS3O95396 460 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 TNFAIP3P21580 790 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 UBASH3AP57075 661 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 FANCCQ00597 558 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 ZNF234Q14588 700 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 NR1I3Q14994 352 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 CLEC16AQ2KHT3 1053 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 SLC25A52Q3SY17 297 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 FNDC3BQ53EP0 1204 aaKnown RBP16.24■□□□□ 0.19
LINC00339-207ENST00000634712 MBLAC2Q68D91 279 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 SERPINA13PQ6UXR4 307 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 PHLDB2Q86SQ0 1253 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.24■□□□□ 0.19
LINC00339-207ENST00000634712 SORCS1Q8WY21 1168 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 LOXL4Q96JB6 756 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 PRICKLE1Q96MT3 831 aaPredicted RBP16.24■□□□□ 0.19
LINC00339-207ENST00000634712 METTL5Q9NRN9 209 aaKnown RBP16.24■□□□□ 0.19
LINC00339-207ENST00000634712 ADAM22Q9P0K1 906 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 USP18Q9UMW8 372 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 WDR87Q6ZQQ6 2873 aa16.24■□□□□ 0.19
LINC00339-207ENST00000634712 A0A1W2PQF6 199 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 LUC7L3O95232 432 aaKnown RBP16.23■□□□□ 0.19
LINC00339-207ENST00000634712 CALB1P05937 261 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 UNGP13051 313 aaPredicted RBP16.23■□□□□ 0.19
LINC00339-207ENST00000634712 CD70P32970 193 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 IL12RB1P42701 662 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 ASIC2Q16515 512 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 PLK5Q496M5 336 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 BRMS1LQ5PSV4 323 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 TTC39BQ5VTQ0 682 aaPredicted RBP16.23■□□□□ 0.19
LINC00339-207ENST00000634712 SFMBT2Q5VUG0 894 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 TMEM215Q68D42 235 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 KIAA1211LQ6NV74 962 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 ARCQ7LC44 396 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 RLN3Q8WXF3 142 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 MYEOVQ96EZ4 313 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 PGAP3Q96FM1 320 aaPredicted RBP16.23■□□□□ 0.19
LINC00339-207ENST00000634712 ZC3H10Q96K80 434 aaKnown RBP16.23■□□□□ 0.19
LINC00339-207ENST00000634712 RPRD1AQ96P16 312 aaPredicted RBP16.23■□□□□ 0.19
LINC00339-207ENST00000634712 PCDHB18PQ96TA0 734 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 TBCBQ99426 244 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 TKTL2Q9H0I9 626 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 SIK2Q9H0K1 926 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 PIGVQ9NUD9 493 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 KIAA1522Q9P206 1035 aaPredicted RBP16.23■□□□□ 0.19
LINC00339-207ENST00000634712 TMEM59LQ9UK28 342 aa16.23■□□□□ 0.19
LINC00339-207ENST00000634712 GPR179Q6PRD1 2367 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 OTOGLQ3ZCN5 2332 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 LRRC53A6NM62 1247 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 PAGE1O75459 146 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 EPHX1P07099 455 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 GABRG2P18507 467 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 FLT3P36888 993 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 CXCR3P49682 368 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 ST8SIA6P61647 398 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 CENPCQ03188 943 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 SPEM2Q0P670 501 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 LMAN2Q12907 356 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 AUHQ13825 339 aaKnown RBP16.22■□□□□ 0.19
LINC00339-207ENST00000634712 IRF2BP2Q7Z5L9 587 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 KIAA0907Q7Z7F0 614 aaPredicted RBP16.22■□□□□ 0.19
LINC00339-207ENST00000634712 ADIPOR2Q86V24 386 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 OLIG1Q8TAK6 271 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 WFDC5Q8TCV5 224 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 CYB5D2Q8WUJ1 264 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 NT5C3BQ969T7 300 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 CFAP57Q96MR6 1250 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 NUP58Q9BVL2 599 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 SELENOOQ9BVL4 669 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 EDEM3Q9BZQ6 932 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 SDK1Q7Z5N4 2213 aa16.22■□□□□ 0.19
LINC00339-207ENST00000634712 LRP3O75074 770 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 ZNF217O75362 1048 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 ADCY5O95622 1261 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 DLDP09622 509 aaKnown RBP16.21■□□□□ 0.19
LINC00339-207ENST00000634712 KRT3P12035 628 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms