RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ZNF296Q8WUU4 475 aaPredicted RBP5.73□□□□□ -1.49
NEK3-211ENST00000629912 SEPT8Q92599 483 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 EDEM1Q92611 657 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 DPF3Q92784 378 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 GRAMD1AQ96CP6 724 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 HDAC11Q96DB2 347 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 C1orf74Q96LT6 269 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 CEP295NLQ96MC4 621 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 CASD1Q96PB1 797 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 SMC6Q96SB8 1091 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 LGMNQ99538 433 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 EPAS1Q99814 870 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 PRMT1Q99873 361 aaKnown RBP5.73□□□□□ -1.49
NEK3-211ENST00000629912 NAT9Q9BTE0 207 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 RHOBTB2Q9BYZ6 727 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 TKTL2Q9H0I9 626 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 SMOC2Q9H3U7 446 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 FBXO44Q9H4M3 255 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 TMPRSS4Q9NRS4 437 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 NKIRAS1Q9NYS0 192 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 MOCS1Q9NZB8 636 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 FNIP2Q9P278 1114 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 OR12D3Q9UGF7 316 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 ZC3H7BQ9UGR2 993 aaKnown RBP5.73□□□□□ -1.49
NEK3-211ENST00000629912 TBK1Q9UHD2 729 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 CHMP2BQ9UQN3 213 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 RRP15Q9Y3B9 282 aaKnown RBP5.73□□□□□ -1.49
NEK3-211ENST00000629912 MFHAS1Q9Y4C4 1052 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 PCDHB5Q9Y5E4 795 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 FAM169AQ9Y6X4 670 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 VWA8A3KMH1 1905 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 PLXNA3P51805 1871 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 GREB1Q4ZG55 1949 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 SYNJ2BP-COX16A0A087WUM0 186 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 A0A1W2PPM1 405 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 MAGEB16A2A368 324 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 FAM159BA6NKW6 160 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 ERI2A8K979 691 aaKnown RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 WASH4PA8MWX3 477 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 FOXO6A8MYZ6 492 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 F8W810 466 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 H7C4K7 107 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 AP3B1O00203 1094 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 RNF103O00237 685 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 TRIM66O15016 1216 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 FGF10O15520 208 aaPredicted RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 IRAK2O43187 625 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 MFSD11O43934 449 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 AVILO75366 819 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 LRIG2O94898 1065 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 ZWINTO95229 277 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 MAP3K6O95382 1288 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 EFEMP2O95967 443 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 APOEP02649 317 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 CXCL10P02778 98 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 MT-ND3P03897 115 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 AMHP03971 560 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 VIMP08670 466 aaKnown RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 SLC2A3P11169 496 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 KRT15P19012 456 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 TAC1P20366 129 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 CCNCP24863 283 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 DNAJB2P25686 324 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 CCR1P32246 355 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 SERPINB6P35237 376 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 NPY2RP49146 381 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 PSEN1P49768 467 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 SERPINB9P50453 376 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 SLC5A3P53794 718 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 MLLT6P55198 1093 aaPredicted RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 WDR4P57081 412 aaKnown RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 IL9RQ01113 521 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 AP1B1Q10567 949 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 IFRD2Q12894 506 aaPredicted RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 DNAJC3Q13217 504 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 GPR17Q13304 367 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 NAB1Q13506 487 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 SPARCL1Q14515 664 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 KBTBD12Q3ZCT8 623 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 SLC39A12Q504Y0 691 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 LACTB2Q53H82 288 aaPredicted RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 TEX44Q53QW1 395 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 VARS2Q5ST30 1063 aaKnown RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 ACBD5Q5T8D3 534 aaPredicted RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 FAXCQ5TGI0 409 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 MANEALQ5VSG8 457 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 TTC39BQ5VTQ0 682 aaPredicted RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 AFMIDQ63HM1 303 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 UNC5AQ6ZN44 842 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 TIFABQ6ZNK6 161 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 PID1Q7Z2X4 250 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 ANKRD33Q7Z3H0 272 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 SLC26A11Q86WA9 606 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 LRRC6Q86X45 466 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 CACNA2D3Q8IZS8 1091 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 TAB3Q8N5C8 712 aaPredicted RBP5.72□□□□□ -1.49
NEK3-211ENST00000629912 BANPQ8N9N5 519 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 CCDC197Q8NCU1 140 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 CCNYQ8ND76 341 aa5.72□□□□□ -1.49
NEK3-211ENST00000629912 SCAMP5Q8TAC9 235 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms