RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 IVDP26440 423 aa25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 HOXA9P31269 272 aa25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 ATP5OP48047 213 aa25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 KCNQ1P51787 676 aa25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 TRIP13Q15645 432 aaPredicted RBP25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 MAP9Q49MG5 647 aa25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 BEND6Q5SZJ8 279 aaPredicted RBP25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 DARS2Q6PI48 645 aaKnown RBP25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 C14orf80Q86SX3 495 aa25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 ZNF683Q8IZ20 524 aa25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 GLIS1Q8NBF1 620 aa25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 AENQ8WTP8 325 aaKnown RBP25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 TBC1D31Q96DN5 1066 aa25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 ARFGAP3Q9NP61 516 aa25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 GRHL1Q9NZI5 618 aa25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 ASIC3Q9UHC3 531 aa25.68■■□□□ 1.7
CAPNS1-215ENST00000628018 BCLAF3A2AJT9 711 aaKnown RBP25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 E9PAM4 449 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 OLFM2O95897 454 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 STIP1P31948 543 aaKnown RBP25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 GDF10P55107 478 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 PRUNE1Q86TP1 453 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 CCHCR1Q8TD31 782 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 RSAD2Q8WXG1 361 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 ARNTL2Q8WYA1 636 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 PLD4Q96BZ4 506 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 KLF16Q9BXK1 252 aaPredicted RBP25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 SLC28A3Q9HAS3 691 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 USP29Q9HBJ7 922 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 RAD54BQ9Y620 910 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 ATG2AQ2TAZ0 1938 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 DENND4CQ5VZ89 1909 aa25.67■■□□□ 1.7
CAPNS1-215ENST00000628018 PER2O15055 1255 aa25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 FGF10O15520 208 aaPredicted RBP25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 RFPL2O75678 378 aa25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 ETS1P14921 441 aa25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 AUHQ13825 339 aaKnown RBP25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 RWDD4Q6NW29 188 aaKnown RBP25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 PDZD4Q76G19 769 aaPredicted RBP25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 ADGRD2Q7Z7M1 963 aa25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 PRMT1Q99873 361 aaKnown RBP25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 CORO1BQ9BR76 489 aa25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 NEUROG2Q9H2A3 272 aa25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 PCDH9Q9HC56 1237 aa25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 ASAH2Q9NR71 780 aa25.66■■□□□ 1.7
CAPNS1-215ENST00000628018 CFAP69A5D8W1 941 aa25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 HNRNPA1P09651 372 aaKnown RBP eCLIP25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 CDC25CP30307 473 aa25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 EPHA5P54756 1037 aa25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 HLTFQ14527 1009 aaKnown RBP eCLIP25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 SLC45A4Q5BKX6 768 aa25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 TXNDC8Q6A555 127 aa25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 B4GALNT4Q76KP1 1039 aa25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 CDKL3Q8IVW4 592 aaPredicted RBP25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 MRPS31Q92665 395 aaKnown RBP25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 QKIQ96PU8 341 aaKnown RBP eCLIP25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 CATSPERBQ9H7T0 1116 aa25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 WHRNQ9P202 907 aa25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 PPARGC1AQ9UBK2 798 aaKnown RBP25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 RANBP2P49792 3224 aaKnown RBP25.65■■□□□ 1.7
CAPNS1-215ENST00000628018 IGLV3-10A0A075B6K4 115 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 HACD1B0YJ81 288 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 STC2O76061 302 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 SEC31AO94979 1220 aaKnown RBP25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 ZSCAN5DPP0CG00 497 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 SERPINB6P35237 376 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 CYP4F8P98187 520 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 NADSYN1Q6IA69 706 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 ZDHHC24Q6UX98 284 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 NPWQ8N729 165 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 FAM71DQ8N9W8 422 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 AZIN2Q96A70 460 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 RTP4Q96DX8 246 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 SNF8Q96H20 258 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 ZFRQ96KR1 1074 aaKnown RBP25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 SLC22A12Q96S37 553 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 TRPC7Q9HCX4 862 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 GKN1Q9NS71 199 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 ZDHHC18Q9NUE0 388 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 DPP7Q9UHL4 492 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 VANGL2Q9ULK5 521 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 HCFC2Q9Y5Z7 792 aa25.64■■□□□ 1.7
CAPNS1-215ENST00000628018 IFNB1P01574 187 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 MBL2P11226 248 aaPredicted RBP25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 PTPN2P17706 415 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 ITIH2P19823 946 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 RBL1P28749 1068 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 ADCY8P40145 1251 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 HARS2P49590 506 aaKnown RBP25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 VPS41P49754 854 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 RAP1GAP2Q684P5 730 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 EMBQ6PCB8 327 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 LRRC31Q6UY01 552 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 RBM23Q86U06 439 aaKnown RBP25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 TDHQ8IZJ6 230 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 GDPD5Q8WTR4 605 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 CYP2S1Q96SQ9 504 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 KLC2Q9H0B6 622 aa25.63■■□□□ 1.69
CAPNS1-215ENST00000628018 ATXN3LQ9H3M9 355 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms