RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.85□□□□□ -0.835e-7■□□□□ 10.3
PDLIM5-223ENST00000627587 FEZ2Q9UHY8 353 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 FZD10Q9ULW2 581 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 AP4E1Q9UPM8 1137 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 SLC27A5Q9Y2P5 690 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 ZFP37Q9Y6Q3 630 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 DOCK4Q8N1I0 1966 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 DENND4CQ5VZ89 1909 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 ATF6P18850 670 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 GBP2P32456 591 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 RDXP35241 583 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 RPL21P46778 160 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 DYNLT1P63172 113 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 OTUD4Q01804 1114 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 DEUP1Q05D60 604 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 IFRD2Q12894 506 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 ANGPT1Q15389 498 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 SLC9A4Q6AI14 798 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 ZDHHC24Q6UX98 284 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 BEND5Q7L4P6 421 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 PRUNE1Q86TP1 453 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 VSIG1Q86XK7 387 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 SLC7A14Q8TBB6 771 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 ACTL9Q8TC94 416 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 IFT81Q8WYA0 676 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 RIN2Q8WYP3 895 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 RNF157Q96PX1 679 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 MAK16Q9BXY0 300 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 DPH5Q9H2P9 285 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 MAN1C1Q9NR34 630 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 FAM53CQ9NYF3 392 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 FNIP2Q9P278 1114 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 SCML2Q9UQR0 700 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 BACE2Q9Y5Z0 518 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 NUP205Q92621 2012 aa9.84□□□□□ -0.83
PDLIM5-223ENST00000627587 PTPRZ1P23471 2315 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 SYNJ2BP-COX16A0A087WUM0 186 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 ZNF487B1APH4 448 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 FAM72CH0Y354 149 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 STK25O00506 426 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 TEX28O15482 410 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 ECEL1O95672 775 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 HAPLN1P10915 354 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 OR1D2P34982 312 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 ID4P47928 161 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 DRG2P55039 364 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 YWHAGP61981 247 aaKnown RBP eCLIP9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 DSG1Q02413 1049 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 DUSP4Q13115 394 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 SEMA3BQ13214 749 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 NME3Q13232 169 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 CUL1Q13616 776 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 TFDP2Q14188 446 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 PSMD5Q16401 504 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 ANKRD20A8PQ5CZ79 823 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 FAM72AQ5TYM5 149 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 FAM72DQ6L9T8 149 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 NPNTQ6UXI9 565 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 TAC4Q86UU9 113 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 FAM72BQ86X60 149 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 RFX6Q8HWS3 928 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 SIX5Q8N196 739 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 NUP93Q8N1F7 819 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 EIF1ADQ8N9N8 165 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 TTC13Q8NBP0 860 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 ATL2Q8NHH9 583 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 DQX1Q8TE96 717 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 CCDC114Q96M63 670 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 ZNF670Q9BS34 389 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 TRIM31Q9BZY9 425 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 FBXO44Q9H4M3 255 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 DHX35Q9H5Z1 703 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 C10orf88Q9H8K7 445 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 PIDD1Q9HB75 910 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 ZDHHC7Q9NXF8 308 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 CWC15Q9P013 229 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 COX16Q9P0S2 106 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 MFHAS1Q9Y4C4 1052 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 CLUHO75153 1309 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 A0A1W2PQH9 124 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 APOC4-APOC2K7ER74 178 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 C2CD2LO14523 706 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 PI15O43692 258 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 ABLIM3O94929 683 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 SEC24AO95486 1093 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 GAS8O95995 478 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 F9P00740 461 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 APOC2P02655 101 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 SRFP11831 508 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 CXCR3P49682 368 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 LMNB2Q03252 620 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 SCAPQ12770 1279 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 PTK6Q13882 451 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 BYSLQ13895 437 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 HLTFQ14527 1009 aaKnown RBP eCLIP9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 PPP1R7Q15435 360 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 MGAT5BQ3V5L5 792 aa9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 PPP6R3Q5H9R7 873 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-223ENST00000627587 BTBD8Q5XKL5 378 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms