RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 PPM1NQ8N819 430 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 LRRC8CQ8TDW0 803 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 SERAC1Q96JX3 654 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 RGS18Q9NS28 235 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 STARD13Q9Y3M8 1113 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 PCDHA11Q9Y5I1 949 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 MYO18AQ92614 2054 aaKnown RBP20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 NLRC5Q86WI3 1866 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 FAM155BO75949 473 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 CKBP12277 381 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 TSPY1Q01534 308 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 LRRC8BQ6P9F7 803 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 BEND5Q7L4P6 421 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 TP53INP2Q8IXH6 220 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 ZNF567Q8N184 647 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 SPOCK2Q92563 424 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 KLF6Q99612 283 aaPredicted RBP20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 TRIM62Q9BVG3 475 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 ABCF3Q9NUQ8 709 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 IGSF9Q9P2J2 1179 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 FRMPD3Q5JV73 1810 aa20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 NCAM2O15394 837 aa20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 FKTNO75072 461 aa20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 GSTA1P08263 222 aa20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 SEPT7Q16181 437 aaKnown RBP20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 FAM47EQ6ZV65 393 aa20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 CYS1Q717R9 158 aa20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 PDCD7Q8N8D1 485 aaKnown RBP20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 TKTL2Q9H0I9 626 aa20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 SMYD2Q9NRG4 433 aa20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 SEPT10Q9P0V9 454 aa20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 PHTF1Q9UMS5 762 aa20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 PATJQ8NI35 1801 aa20.29■□□□□ 0.84
PCDHB11-202ENST00000624887 FAM159BA6NKW6 160 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 F8W810 466 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 H0YHG0 523 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 KRT37O76014 449 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 EOMESO95936 686 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 SNRPAP09012 282 aaKnown RBP20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 ADRA1DP25100 572 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 LGSNQ5TDP6 509 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 TRAF7Q6Q0C0 670 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 RTN4RL1Q86UN2 441 aaPredicted RBP20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 TAC4Q86UU9 113 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 APOPT1Q96IL0 206 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 GLT1D1Q96MS3 346 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 EPAS1Q99814 870 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 YY1AP1Q9H869 796 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 PCDHB8Q9UN66 801 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 SLC12A4Q9UP95 1085 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 MOXD2PA6NHM9 499 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 LPXNO60711 386 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 EDF1O60869 148 aaKnown RBP20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 PSMB4P28070 264 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 NEK3P51956 506 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 PPIDQ08752 370 aaKnown RBP20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 ARHGEF6Q15052 776 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 ICE2Q659A1 982 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 STEAP4Q687X5 459 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 GLB1LQ6UWU2 654 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 ZNF296Q8WUU4 475 aaPredicted RBP20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 ZNF75CPQ92670 426 aaPredicted RBP20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 APBB2Q92870 758 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 STAMBPL1Q96FJ0 436 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 TRIM56Q9BRZ2 755 aaKnown RBP20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 CEP41Q9BYV8 373 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 BRD8Q9H0E9 1235 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 VPS11Q9H270 941 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 KLHL14Q9P2G3 628 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 SLC17A7Q9P2U7 560 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 OR12D3Q9UGF7 316 aa20.28■□□□□ 0.84
PCDHB11-202ENST00000624887 SDR42E2A6NKP2 422 aa20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 F5H423 210 aaPredicted RBP20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 PYGBP11216 843 aa20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 ALADP13716 330 aa20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 YWHAHQ04917 246 aaPredicted RBP20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 RNF43Q68DV7 783 aa20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 TRMT10BQ6PF06 316 aaKnown RBP20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 SLC24A5Q71RS6 500 aa20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 ZNF276Q8N554 614 aa20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 NPWQ8N729 165 aa20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 DQX1Q8TE96 717 aaKnown RBP20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 SLCO1B3Q9NPD5 702 aa20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 SAGE1Q9NXZ1 904 aa20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 MOCS1Q9NZB8 636 aa20.27■□□□□ 0.84
PCDHB11-202ENST00000624887 TRIM49D1C9J1S8 452 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 IGLV3-25P01717 112 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 CSH1P0DML2 217 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 CSH2P0DML3 217 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 MX2P20592 715 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 PTPN3P26045 913 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 DSC1Q08554 894 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 IFRD2Q12894 506 aaPredicted RBP20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 EIF4EBP2Q13542 120 aaPredicted RBP20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 C4orf50Q6ZRC1 276 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 PID1Q7Z2X4 250 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 PACS2Q86VP3 889 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 CNPY4Q8N129 248 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 GBP7Q8N8V2 638 aaPredicted RBP20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 CCDC63Q8NA47 563 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms