RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 ATP12AP54707 1039 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 PLTPP55058 493 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 RUNX2Q13950 521 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 NKX1-1Q15270 411 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ZMYM1Q5SVZ6 1142 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ZDHHC20Q5W0Z9 365 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 FAM81AQ8TBF8 368 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ZNF564Q8TBZ8 553 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 GIPC3Q8TF64 312 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 BARX2Q9UMQ3 279 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 SYNPO2Q9UMS6 1093 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 DNMT3AQ9Y6K1 912 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ZNF780BQ9Y6R6 833 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 MYOM2P54296 1465 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 CTIFO43310 598 aaKnown RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 SCN2BO60939 215 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 FTH1P02794 183 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 RLN1P04808 185 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 NDST1P52848 882 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 TBX4P57082 545 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 WDR93Q6P2C0 686 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 LPCAT2Q7L5N7 544 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 DYNLL2Q96FJ2 89 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ZFP14Q9HCL3 533 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ATP13A1Q9HD20 1204 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 TRPC5OSA6NMA1 111 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 RAD51BO15315 384 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 SEC31AO94979 1220 aaKnown RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 RIN1Q13671 783 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 PPM1NQ8N819 430 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ANKFN1Q8N957 763 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 C5orf34Q96MH7 638 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 GANQ9H2C0 597 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 SERHL2Q9H4I8 314 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ATP13A3Q9H7F0 1226 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 SERHLQ9NQF3 203 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 WDR19Q8NEZ3 1342 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 RAMP2O60895 175 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 WFS1O76024 890 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ACO1P21399 889 aaKnown RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 GDI2P50395 445 aaKnown RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 BOP1Q14137 746 aaKnown RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 OR10Q1Q8NGQ4 319 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 OR10G6Q8NH81 332 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ZNF333Q96JL9 665 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 MINPP1Q9UNW1 487 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 HPSEQ9Y251 543 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 DAB1O75553 588 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 CATP04040 527 aaKnown RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 IL12BP29460 328 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 NUDT2P50583 147 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 RBBP4Q09028 425 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ARMC12Q5T9G4 340 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 RASAL3Q86YV0 1011 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 TTLL11Q8NHH1 800 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 PROX1Q92786 737 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 CPNE2Q96FN4 548 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 AGAP3Q96P47 875 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 CKLFQ9UBR5 152 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ATP5A1P25705 553 aaKnown RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 OR1E1P30953 314 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 GCLMP48507 274 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 EIF3EP60228 445 aaKnown RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 TMEM143Q96AN5 459 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 HAVCR1Q96D42 359 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 CMTM5Q96DZ9 223 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 RHBGQ9H310 441 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 BTBD17A6NE02 478 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 H3BRB1 525 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 FDFT1P37268 417 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 BCAP31P51572 246 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 PYHIN1Q6K0P9 492 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 CNBD2Q96M20 576 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 TUT1Q9H6E5 874 aaKnown RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 TTC7AQ9ULT0 858 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-205ENST00000623535 KAT6AQ92794 2004 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 MAN2B1O00754 1011 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 DRD4P21917 467 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 TFDP3Q5H9I0 405 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 MDH1BQ5I0G3 518 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 RNF43Q68DV7 783 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 FBXO38Q6PIJ6 1188 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 ADGRF4Q8IZF3 695 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 GATAD2BQ8WXI9 593 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 GOLPH3Q9H4A6 298 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 SLC2A4RGQ9NR83 387 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 MTRRQ9UBK8 725 aa6.43□□□□□ -1.38
CDKL5-205ENST00000623535 PGLSO95336 258 aa6.42□□□□□ -1.38
CDKL5-205ENST00000623535 HDCP19113 662 aa6.42□□□□□ -1.38
CDKL5-205ENST00000623535 PLCG1P19174 1290 aa6.42□□□□□ -1.38
CDKL5-205ENST00000623535 HSPA9P38646 679 aaKnown RBP6.42□□□□□ -1.38
CDKL5-205ENST00000623535 ZNF135P52742 658 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-205ENST00000623535 C2orf27AQ580R0 203 aa6.42□□□□□ -1.38
CDKL5-205ENST00000623535 UNC13DQ70J99 1090 aa6.42□□□□□ -1.38
CDKL5-205ENST00000623535 CDR2LQ86X02 465 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-205ENST00000623535 HJURPQ8NCD3 748 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-205ENST00000623535 BAP1Q92560 729 aa6.42□□□□□ -1.38
CDKL5-205ENST00000623535 EIF2AK1Q9BQI3 630 aaKnown RBP6.42□□□□□ -1.38
CDKL5-205ENST00000623535 NGBQ9NPG2 151 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms