RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 C1orf74Q96LT6 269 aa7.23□□□□□ -1.25
CBWD3-219ENST00000622817 TGS1Q96RS0 853 aaKnown RBP7.23□□□□□ -1.25
CBWD3-219ENST00000622817 C17orf80Q9BSJ5 609 aa7.23□□□□□ -1.25
CBWD3-219ENST00000622817 TMEM121Q9BTD3 319 aa7.23□□□□□ -1.25
CBWD3-219ENST00000622817 PCDH9Q9HC56 1237 aa7.23□□□□□ -1.25
CBWD3-219ENST00000622817 GRHL1Q9NZI5 618 aa7.23□□□□□ -1.25
CBWD3-219ENST00000622817 DNMT3LQ9UJW3 386 aa7.23□□□□□ -1.25
CBWD3-219ENST00000622817 HBS1LQ9Y450 684 aaKnown RBP7.23□□□□□ -1.25
CBWD3-219ENST00000622817 PCDHA11Q9Y5I1 949 aa7.23□□□□□ -1.25
CBWD3-219ENST00000622817 RAD54BQ9Y620 910 aa7.23□□□□□ -1.25
CBWD3-219ENST00000622817 SLC12A8A0AV02 714 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 BCLAF3A2AJT9 711 aaKnown RBP7.22□□□□□ -1.25
CBWD3-219ENST00000622817 GRXCR2A6NFK2 248 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 HACD1B0YJ81 288 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 FAM72CH0Y354 149 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 NDC80O14777 642 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 DCLK1O15075 740 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 ZNF189O75820 626 aaPredicted RBP7.22□□□□□ -1.25
CBWD3-219ENST00000622817 LRIG2O94898 1065 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 SEC31AO94979 1220 aaKnown RBP7.22□□□□□ -1.25
CBWD3-219ENST00000622817 GLUD1P00367 558 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 LRG1P02750 347 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 SPATA31D3P0C874 917 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 ERCC2P18074 760 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 EPHB2P29323 1055 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 ECHS1P30084 290 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 TNNT3P45378 269 aaPredicted RBP7.22□□□□□ -1.25
CBWD3-219ENST00000622817 MLLT6P55198 1093 aaPredicted RBP7.22□□□□□ -1.25
CBWD3-219ENST00000622817 GBE1Q04446 702 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 PAFAH1B3Q15102 231 aaKnown RBP7.22□□□□□ -1.25
CBWD3-219ENST00000622817 PDK1Q15118 436 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 TRIP13Q15645 432 aaPredicted RBP7.22□□□□□ -1.25
CBWD3-219ENST00000622817 FAM72AQ5TYM5 149 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 PLPP4Q5VZY2 271 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 NUGGCQ68CJ6 796 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 NCBP2-AS2Q69YL0 99 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 PDE12Q6L8Q7 609 aaKnown RBP7.22□□□□□ -1.25
CBWD3-219ENST00000622817 FAM72DQ6L9T8 149 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 SPATA31D4Q6ZUB0 917 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 RTL10Q7L3V2 364 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 ZC3H18Q86VM9 953 aaKnown RBP7.22□□□□□ -1.25
CBWD3-219ENST00000622817 FAM72BQ86X60 149 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 KREMEN2Q8NCW0 462 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 MICAL1Q8TDZ2 1067 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 LRRC45Q96CN5 670 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 BTN2A3PQ96KV6 586 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 NACA2Q9H009 215 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 SIK2Q9H0K1 926 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 CCSER2Q9H7U1 834 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 ETNK2Q9NVF9 386 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 ZNF446Q9NWS9 450 aa7.22□□□□□ -1.25
CBWD3-219ENST00000622817 HIDE1A8MVS5 230 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 GRXCR1A8MXD5 290 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 NCAM2O15394 837 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 FGF10O15520 208 aaPredicted RBP7.21□□□□□ -1.25
CBWD3-219ENST00000622817 MOCS2O96007 188 aaPredicted RBP7.21□□□□□ -1.25
CBWD3-219ENST00000622817 IFNB1P01574 187 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 IGLV3-27P01718 113 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 CA3P07451 260 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 SRGAP2BP0DMP2 458 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 MYOGP15173 224 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 DNAJB1P25685 340 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 IVDP26440 423 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 SERPINB6P35237 376 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 PLTPP55058 493 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 ERVK-21P61565 698 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 COG7P83436 770 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 SLC45A4Q5BKX6 768 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 ZDHHC24Q6UX98 284 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 UNC45BQ8IWX7 931 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 ELMOD1Q8N336 334 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 FAM71DQ8N9W8 422 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 ART4Q93070 314 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 TBC1D31Q96DN5 1066 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 QKIQ96PU8 341 aaKnown RBP eCLIP7.21□□□□□ -1.25
CBWD3-219ENST00000622817 FMO2Q99518 471 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 FERMT1Q9BQL6 677 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 BRD8Q9H0E9 1235 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 TSPYL1Q9H0U9 437 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 CATSPERBQ9H7T0 1116 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 ZDHHC18Q9NUE0 388 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 DTLQ9NZJ0 730 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 MTRF1LQ9UGC7 380 aaKnown RBP7.21□□□□□ -1.25
CBWD3-219ENST00000622817 ANAPC5Q9UJX4 755 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 SNX10Q9Y5X0 201 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 HS3ST4Q9Y661 456 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 CEP290O15078 2479 aa7.21□□□□□ -1.25
CBWD3-219ENST00000622817 PLXNA4Q9HCM2 1894 aa7.21□□□□□ -1.26
CBWD3-219ENST00000622817 PPP1R12AO14974 1030 aaPredicted RBP7.21□□□□□ -1.26
CBWD3-219ENST00000622817 GRM6O15303 877 aa7.21□□□□□ -1.26
CBWD3-219ENST00000622817 MAP3K7O43318 606 aa7.21□□□□□ -1.26
CBWD3-219ENST00000622817 COCHO43405 550 aa7.21□□□□□ -1.26
CBWD3-219ENST00000622817 MFSD11O43934 449 aa7.21□□□□□ -1.26
CBWD3-219ENST00000622817 STK10O94804 968 aaKnown RBP7.21□□□□□ -1.26
CBWD3-219ENST00000622817 C8AP07357 584 aa7.21□□□□□ -1.26
CBWD3-219ENST00000622817 FAM153BP0C7A2 387 aa7.21□□□□□ -1.26
CBWD3-219ENST00000622817 MX2P20592 715 aa7.21□□□□□ -1.26
CBWD3-219ENST00000622817 HOXC13P31276 330 aa7.21□□□□□ -1.26
CBWD3-219ENST00000622817 ACTN2P35609 894 aa7.21□□□□□ -1.26
CBWD3-219ENST00000622817 VPS41P49754 854 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms