RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 GJC1P36383 396 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 MARCKSL1P49006 195 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 PEX5P50542 639 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 PFKPQ01813 784 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 SEMA3BQ13214 749 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 CA9Q16790 459 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 ATP13A4Q4VNC1 1196 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 KATNAL2Q8IYT4 538 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 CPXM2Q8N436 756 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 FAM71BQ8TC56 605 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 HSPH1Q92598 858 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 IRF7Q92985 503 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 DHX35Q9H5Z1 703 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 THG1LQ9NWX6 298 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 CA14Q9ULX7 337 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 PACSIN2Q9UNF0 486 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 GFRA2O00451 464 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 SCAMP3O14828 347 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 DDX3YO15523 660 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 TNNT1P13805 278 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 CHKAP35790 457 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 ARSEP51690 589 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 ZNF135P52742 658 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 ETF1P62495 437 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 AUHQ13825 339 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 MANEALQ5VSG8 457 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 RAP1GAP2Q684P5 730 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 UBL4BQ8N7F7 174 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 OSCP1Q8WVF1 389 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 ZFYVE19Q96K21 471 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 TLR10Q9BXR5 811 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 MAGEB5Q9BZ81 275 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 SIK2Q9H0K1 926 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 OR12D3Q9UGF7 316 aa20.5■□□□□ 0.87
PDLIM2-221ENST00000622702 KIF26AQ9ULI4 1882 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 CHADO15335 359 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 GPR37L1O60883 481 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 TACR2P21452 398 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 SLC6A4P31645 630 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 PDK2Q15119 407 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 RPS6KA1Q15418 735 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 TMEM31Q5JXX7 168 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 ARTNQ5T4W7 220 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 IER5LQ5T953 404 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 CHSY1Q86X52 802 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 ZNF683Q8IZ20 524 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 SIX5Q8N196 739 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 PYROXD2Q8N2H3 581 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 ALG3Q92685 438 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 WDR24Q96S15 920 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 KCTD15Q96SI1 283 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 PCDH18Q9HCL0 1135 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 SNX10Q9Y5X0 201 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 WNT6Q9Y6F9 365 aa20.49■□□□□ 0.87
PDLIM2-221ENST00000622702 TICRRQ7Z2Z1 1910 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 GOLGA6L7A0A1B0GV03 622 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 KRBA1A5PL33 1030 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 F5H5T6 163 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 FAM72CH0Y354 149 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 HTR7P34969 479 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 GGCXP38435 758 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 CDH6P55285 790 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 RWDD2BP57060 319 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 PDGFRLQ15198 375 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 C5orf22Q49AR2 442 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 FAM72AQ5TYM5 149 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 FAM72DQ6L9T8 149 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 FBXL22Q6P050 247 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 C14orf80Q86SX3 495 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 FAM72BQ86X60 149 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 VSIG1Q86XK7 387 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 EXD1Q8NHP7 514 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 RAPGEF5Q92565 580 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 DNASE1L2Q92874 299 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 PBXIP1Q96AQ6 731 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 EPAS1Q99814 870 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 FAM83CQ9BQN1 747 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 ARHGEF3Q9NR81 526 aa20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 DUS2Q9NX74 493 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 RCOR3Q9P2K3 495 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-221ENST00000622702 IGLV3-10A0A075B6K4 115 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 ARNTLO00327 626 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 LRIG2O94898 1065 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 ZRANB2O95218 330 aaKnown RBP eCLIP20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 PDGFBP01127 241 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 KRT1P04264 644 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 KDELR1P24390 212 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 IFNAR2P48551 515 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 HCAR3P49019 387 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 EML3Q32P44 896 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 SLC44A4Q53GD3 710 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 PPP6R3Q5H9R7 873 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 ZFYVE27Q5T4F4 411 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 RFWD3Q6PCD5 774 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 LRRC31Q6UY01 552 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 MAP7D3Q8IWC1 876 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 ADGRG2Q8IZP9 1017 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 KCTD6Q8NC69 237 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 TSC1Q92574 1164 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 LINC00597Q9H2U6 94 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms