RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 GOLGA6L7A0A1B0GV03 622 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 SCAMP3O14828 347 aaKnown RBP19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 DCLK1O15075 740 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 ECEL1O95672 775 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 ETS1P14921 441 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 TGM2P21980 687 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 EPHB2P29323 1055 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 IRAK1P51617 712 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 MS4A13Q5J8X5 152 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 RWDD4Q6NW29 188 aaKnown RBP19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 NKD2Q969F2 451 aaPredicted RBP19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 TIFAQ96CG3 184 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 MYEOVQ96EZ4 313 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 CDK5RAP1Q96SZ6 601 aaKnown RBP19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 EPAS1Q99814 870 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 TLE6Q9H808 572 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 HOMER3Q9NSC5 361 aa19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 DNMT3BQ9UBC3 853 aaKnown RBP19.2■□□□□ 0.66
SEMA6C-210ENST00000621728 ZSCAN5DPP0CG00 497 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 CARSP49589 748 aaKnown RBP19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 GDF10P55107 478 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 ZXDBP98169 803 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 MANEALQ5VSG8 457 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 RAP1GAP2Q684P5 730 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 NADSYN1Q6IA69 706 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 TADA2BQ86TJ2 420 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 C12orf76Q8N812 135 aaPredicted RBP19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 TTC13Q8NBP0 860 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 VN1R2Q8NFZ6 395 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 ATL2Q8NHH9 583 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 ATXN3LQ9H3M9 355 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 ASAH2Q9NR71 780 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 PSD3Q9NYI0 1048 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 DTLQ9NZJ0 730 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 VANGL2Q9ULK5 521 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 HBS1LQ9Y450 684 aaKnown RBP19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 BHMG1C9JSJ3 638 aaPredicted RBP19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 E9PAM4 449 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 RBP3P10745 1247 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 SLC2A3P11169 496 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 MBL2P11226 248 aaPredicted RBP19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 TNFRSF8P28908 595 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 PPP3CCP48454 512 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 VPS41P49754 854 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 TUBP50607 506 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 MLLT6P55198 1093 aaPredicted RBP19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 DRICH1Q6PGQ1 229 aaPredicted RBP19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 KLHDC10Q6PID8 442 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 UNC45BQ8IWX7 931 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 NPWQ8N729 165 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 MAB21L3Q8N8X9 362 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 ATP6V0D2Q8N8Y2 350 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 IFT81Q8WYA0 676 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 ZFRQ96KR1 1074 aaKnown RBP19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 KLF16Q9BXK1 252 aaPredicted RBP19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 GDF3Q9NR23 364 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 MPP6Q9NZW5 540 aa19.19■□□□□ 0.66
SEMA6C-210ENST00000621728 FAM187AA6NFU0 413 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 H7C0C1 242 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 MCF2LO15068 1137 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 STC2O76061 302 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 KLKB1P03952 638 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 ATP5OP48047 213 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 RING1Q06587 406 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 PPP1R7Q15435 360 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 DUSP6Q16828 381 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 SLC5A9Q2M3M2 681 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 PABPC1LQ4VXU2 614 aaKnown RBP19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 HSP90B2PQ58FF3 399 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 CCNI2Q6ZMN8 369 aaPredicted RBP19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 GSTA5Q7RTV2 222 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 ZNF683Q8IZ20 524 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 TTC16Q8NEE8 873 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 SHKBP1Q8TBC3 707 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 SLCO2A1Q92959 643 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 BTN2A3PQ96KV6 586 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 ERP44Q9BS26 406 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 SNX24Q9Y343 169 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 NEU2Q9Y3R4 380 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 SZT2Q5T011 3432 aa19.18■□□□□ 0.66
SEMA6C-210ENST00000621728 HCAR3P49019 387 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 AUHQ13825 339 aaKnown RBP19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 ALLCQ8N6M5 410 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 MRPS31Q92665 395 aaKnown RBP19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 EXOC4Q96A65 974 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 ZNF707Q96C28 371 aaPredicted RBP19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 PRDM4Q9UKN5 801 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 NUP205Q92621 2012 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 CCDC195A0A1B0GUA6 201 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 SGK1O00141 431 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 MOSPD3O75425 235 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 ITGAVP06756 1048 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 RHOP08100 348 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 ZFXP17010 805 aaPredicted RBP19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 HDCP19113 662 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 PAFAH1B3Q15102 231 aaKnown RBP19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 DUPD1Q68J44 220 aa19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 DARS2Q6PI48 645 aaKnown RBP19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 GRASPQ7Z6J2 395 aaPredicted RBP19.17■□□□□ 0.66
SEMA6C-210ENST00000621728 CIR1Q86X95 450 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms