RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 IRX2Q9BZI1 471 aaPredicted RBP14.81□□□□□ -0.04
CBWD3-217ENST00000621474 LMAN1LQ9HAT1 526 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 MRPL47Q9HD33 250 aaKnown RBP14.81□□□□□ -0.04
CBWD3-217ENST00000621474 DNAJC17Q9NVM6 304 aaKnown RBP14.81□□□□□ -0.04
CBWD3-217ENST00000621474 HCN2Q9UL51 889 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 CHD5Q8TDI0 1954 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 GOLGA6L3A6NEY3 463 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 MUC22E2RYF6 1773 aaPredicted RBP14.81□□□□□ -0.04
CBWD3-217ENST00000621474 KAT7O95251 611 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 TMEM253P0C7T8 217 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 DRD1P21728 446 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 ADRA1BP35368 520 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 GRSF1Q12849 480 aaKnown RBP eCLIP14.81□□□□□ -0.04
CBWD3-217ENST00000621474 C5orf22Q49AR2 442 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 PKN3Q6P5Z2 889 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 RAD9BQ6WBX8 426 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 SND1Q7KZF4 910 aaKnown RBP eCLIP14.81□□□□□ -0.04
CBWD3-217ENST00000621474 SUGP1Q8IWZ8 645 aaKnown RBP14.81□□□□□ -0.04
CBWD3-217ENST00000621474 LGI2Q8N0V4 545 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 CFAP52Q8N1V2 620 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 TERB1Q8NA31 727 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 PNKPQ96T60 521 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 OSGEPQ9NPF4 335 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 ARHGEF4Q9NR80 690 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 TMEM51Q9NW97 253 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 DEC1Q9P2X7 70 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 SLC12A6Q9UHW9 1150 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 NEU3Q9UQ49 428 aa14.81□□□□□ -0.04
CBWD3-217ENST00000621474 VPS13AQ96RL7 3174 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 TBL1XO60907 577 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 LRCH4O75427 683 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 CYBBP04839 570 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 H2AFZP0C0S5 128 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 PSMA2P25787 234 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 HLA-FP30511 346 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 DGKGP49619 791 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 TMEM215Q68D42 235 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 H2AFVQ71UI9 128 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 CIR1Q86X95 450 aaPredicted RBP14.8□□□□□ -0.04
CBWD3-217ENST00000621474 CCDC170Q8IYT3 715 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 NTAN1Q96AB6 310 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 LMLNQ96KR4 655 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 C1orf74Q96LT6 269 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 XPO6Q96QU8 1125 aaKnown RBP14.8□□□□□ -0.04
CBWD3-217ENST00000621474 HAPLN3Q96S86 360 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 PEBP4Q96S96 227 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 DDX50Q9BQ39 737 aaKnown RBP14.8□□□□□ -0.04
CBWD3-217ENST00000621474 SIK2Q9H0K1 926 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 CHRDQ9H2X0 955 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 C2orf42Q9NWW7 574 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 VANGL2Q9ULK5 521 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 SLC27A6Q9Y2P4 619 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 PAXBP1Q9Y5B6 917 aa14.8□□□□□ -0.04
CBWD3-217ENST00000621474 IGLV3-10A0A075B6K4 115 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-217ENST00000621474 PRRT4C9JH25 899 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 F5H5T6 163 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 FAM72CH0Y354 149 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 RNF40O75150 1001 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 TCF4P15884 667 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 GRIA2P42262 883 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 KIR2DL1P43626 348 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-217ENST00000621474 SCAPQ12770 1279 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 MTA1Q13330 715 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 GEN1Q17RS7 908 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 FSCBQ5H9T9 825 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 DGKKQ5KSL6 1271 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 FAM72AQ5TYM5 149 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 MANEALQ5VSG8 457 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 FAM72DQ6L9T8 149 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 FAM72BQ86X60 149 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 TMTC1Q8IUR5 882 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 HJURPQ8NCD3 748 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-217ENST00000621474 ZNF564Q8TBZ8 553 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-217ENST00000621474 CTNNBL1Q8WYA6 563 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-217ENST00000621474 BAG1Q99933 345 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-217ENST00000621474 ANAPC7Q9UJX3 599 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 TFR2Q9UP52 801 aa14.79□□□□□ -0.04
CBWD3-217ENST00000621474 REXO2Q9Y3B8 237 aaKnown RBP14.79□□□□□ -0.04
CBWD3-217ENST00000621474 EIF3CLB5ME19 914 aaKnown RBP14.78□□□□□ -0.04
CBWD3-217ENST00000621474 NDUFA10O95299 355 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 MTAPQ13126 283 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 ALFQ53S48 1182 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 GRAMD4Q6IC98 578 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 KIAA0907Q7Z7F0 614 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-217ENST00000621474 CPNE8Q86YQ8 564 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 PYROXD2Q8N2H3 581 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 SYNPOQ8N3V7 929 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 NIPA2Q8N8Q9 360 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 OR52K2Q8NGK3 314 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 RPRD1AQ96P16 312 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-217ENST00000621474 EIF3CQ99613 913 aaKnown RBP14.78□□□□□ -0.04
CBWD3-217ENST00000621474 SLC2A11Q9BYW1 496 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 ZDHHC4Q9NPG8 344 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 STIM2Q9P246 746 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 ZNF212Q9UDV6 495 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 FZD10Q9ULW2 581 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 EPN1Q9Y6I3 576 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-217ENST00000621474 CACNA1HO95180 2353 aa14.78□□□□□ -0.04
CBWD3-217ENST00000621474 RCCD1A6NED2 376 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms