RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 XPO7Q9UIA9 1087 aaKnown RBP16.59■□□□□ 0.25
BRCA1-228ENST00000618469 HCN2Q9UL51 889 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 STARD13Q9Y3M8 1113 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 LAMA1P25391 3075 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 TCRBV21S2A2A0A5A6 115 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 TYW5A2RUC4 315 aaKnown RBP16.58■□□□□ 0.24
BRCA1-228ENST00000618469 GOLGA8SH3BPF8 625 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 TBL1XO60907 577 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 EPN2O95208 641 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 SERPINC1P01008 464 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 CHRNB2P17787 502 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 NTSR1P30989 418 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 GABRB2P47870 512 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 TPM4P67936 248 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 PIK3R6Q5UE93 754 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 RNF43Q68DV7 783 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 UNQ6494/PRO21346Q6UXR6 183 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 CHSY1Q86X52 802 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 XYLT1Q86Y38 959 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 AZIN2Q96A70 460 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 ACOX2Q99424 681 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 SLC2A11Q9BYW1 496 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 POLMQ9NP87 494 aaPredicted RBP16.58■□□□□ 0.24
BRCA1-228ENST00000618469 BCCIPQ9P287 314 aaKnown RBP eCLIP16.58■□□□□ 0.24
BRCA1-228ENST00000618469 EBF1Q9UH73 591 aa16.58■□□□□ 0.24
BRCA1-228ENST00000618469 MUC22E2RYF6 1773 aaPredicted RBP16.58■□□□□ 0.24
BRCA1-228ENST00000618469 MYO18AQ92614 2054 aaKnown RBP16.57■□□□□ 0.24
BRCA1-228ENST00000618469 A0A1B0GTH6 734 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 DCLK1O15075 740 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 FOXD2O60548 495 aaPredicted RBP16.57■□□□□ 0.24
BRCA1-228ENST00000618469 ALDH1A2O94788 518 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 GBP1P32455 592 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 MPLP40238 635 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 NOVA1P51513 510 aaKnown RBP16.57■□□□□ 0.24
BRCA1-228ENST00000618469 RNASE9P60153 205 aaKnown RBP16.57■□□□□ 0.24
BRCA1-228ENST00000618469 NME3Q13232 169 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 SKOR2Q2VWA4 1001 aaPredicted RBP16.57■□□□□ 0.24
BRCA1-228ENST00000618469 OTUD1Q5VV17 481 aaPredicted RBP16.57■□□□□ 0.24
BRCA1-228ENST00000618469 RAP1GAP2Q684P5 730 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 TRIM72Q6ZMU5 477 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 MMS22LQ6ZRQ5 1243 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 RASSF3Q86WH2 238 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 HMGB4Q8WW32 186 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 RNF34Q969K3 372 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 ERLEC1Q96DZ1 483 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 BTN2A3PQ96KV6 586 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 C11orf70Q9BRQ4 267 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 CIPCQ9C0C6 399 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 SEPT11Q9NVA2 429 aaKnown RBP16.57■□□□□ 0.24
BRCA1-228ENST00000618469 CACNA2D2Q9NY47 1150 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 STIM2Q9P246 746 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 STAP1Q9ULZ2 295 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 RAD54BQ9Y620 910 aa16.57■□□□□ 0.24
BRCA1-228ENST00000618469 CEP295Q9C0D2 2601 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 C4orf47A7E2U8 309 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 M0QYT0 321 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 CYP1A1P04798 512 aaPredicted RBP16.56■□□□□ 0.24
BRCA1-228ENST00000618469 TACR2P21452 398 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 HLA-FP30511 346 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 CCR1P32246 355 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 NOS2P35228 1153 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 SCNN1AP37088 669 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 MATKP42679 507 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 SULT1E1P49888 294 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 RPS24P62847 133 aaKnown RBP16.56■□□□□ 0.24
BRCA1-228ENST00000618469 EIF4HQ15056 248 aaKnown RBP16.56■□□□□ 0.24
BRCA1-228ENST00000618469 MS4A13Q5J8X5 152 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 SDE2Q6IQ49 451 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 MFN1Q8IWA4 741 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 LGI2Q8N0V4 545 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 ATP6V0D2Q8N8Y2 350 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 WFDC5Q8TCV5 224 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 UCMAQ8WVF2 138 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 MYEOVQ96EZ4 313 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 IRX2Q9BZI1 471 aaPredicted RBP16.56■□□□□ 0.24
BRCA1-228ENST00000618469 METTL5Q9NRN9 209 aaKnown RBP16.56■□□□□ 0.24
BRCA1-228ENST00000618469 ABCB8Q9NUT2 735 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.56■□□□□ 0.24
BRCA1-228ENST00000618469 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.56■□□□□ 0.24
BRCA1-228ENST00000618469 GGA2Q9UJY4 613 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 INVSQ9Y283 1065 aa16.56■□□□□ 0.24
BRCA1-228ENST00000618469 SPEGQ15772 3267 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 F5H5T6 163 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 GOLGA6L19H0YKK7 550 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 CAVIN2O95810 425 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 SLC2A3P11169 496 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 PABPC1P11940 636 aaKnown RBP16.55■□□□□ 0.24
BRCA1-228ENST00000618469 FERP16591 822 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 TFE3P19532 575 aaPredicted RBP16.55■□□□□ 0.24
BRCA1-228ENST00000618469 ABCB4P21439 1286 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 FLT3P36888 993 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 NSFP46459 744 aaKnown RBP16.55■□□□□ 0.24
BRCA1-228ENST00000618469 EIF4EBP2Q13542 120 aaPredicted RBP16.55■□□□□ 0.24
BRCA1-228ENST00000618469 CDH18Q13634 790 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 PLA2G2CQ5R387 149 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 MPP7Q5T2T1 576 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 AHI1Q8N157 1196 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
BRCA1-228ENST00000618469 PGBD3Q8N328 593 aa16.55■□□□□ 0.24
BRCA1-228ENST00000618469 SLC30A5Q8TAD4 765 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms