RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 GRAMD1CQ8IYS0 662 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 FUKQ8N0W3 1084 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 PIP4K2CQ8TBX8 421 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 DNASE2BQ8WZ79 361 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 ELMO3Q96BJ8 720 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 CDK5RAP1Q96SZ6 601 aaKnown RBP8.95□□□□□ -0.98
GPC6-202ENST00000617456 CDC6Q99741 560 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 NT5C1AQ9BXI3 368 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 KLF16Q9BXK1 252 aaPredicted RBP8.95□□□□□ -0.98
GPC6-202ENST00000617456 METTL14Q9HCE5 456 aaKnown RBP8.95□□□□□ -0.98
GPC6-202ENST00000617456 TMEM8AQ9HCN3 771 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 KRT82Q9NSB4 513 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 SPTLC3Q9NUV7 552 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 TOR4AQ9NXH8 423 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 WSB2Q9NYS7 404 aaPredicted RBP8.95□□□□□ -0.98
GPC6-202ENST00000617456 KIAA1522Q9P206 1035 aaPredicted RBP8.95□□□□□ -0.98
GPC6-202ENST00000617456 WDR35Q9P2L0 1181 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 EIF2B4Q9UI10 523 aaKnown RBP8.95□□□□□ -0.98
GPC6-202ENST00000617456 LSM7Q9UK45 103 aaKnown RBP8.95□□□□□ -0.98
GPC6-202ENST00000617456 BTBD3Q9Y2F9 522 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 PCDHA5Q9Y5H7 936 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 ASH1LQ9NR48 2969 aaKnown RBP8.95□□□□□ -0.98
GPC6-202ENST00000617456 PTPRBP23467 1997 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 GOLGA6L4A6NEF3 574 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 METTL12A8MUP2 240 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 KCNJ18B7U540 433 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 GFRA2O00451 464 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 KCNK3O14649 394 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 MDM4O15151 490 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 CETN3O15182 167 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 PMM2O15305 246 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 SLC16A3O15427 465 aaKnown RBP8.94□□□□□ -0.98
GPC6-202ENST00000617456 FLRT2O43155 660 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 SYNCRIPO60506 623 aaKnown RBP8.94□□□□□ -0.98
GPC6-202ENST00000617456 GREM1O60565 184 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 SMC2O95347 1197 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 HLA-DRAP01903 254 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 TPM1P09493 284 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 CISD3P0C7P0 127 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 ASPAP45381 313 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 CSNK1EP49674 416 aaKnown RBP8.94□□□□□ -0.98
GPC6-202ENST00000617456 DLG4P78352 724 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 FKBP3Q00688 224 aaKnown RBP8.94□□□□□ -0.98
GPC6-202ENST00000617456 LRRC63Q05C16 580 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 GOLGA8FQ08AF8 430 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 GOLGA8DPQ0D2H9 430 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 C19orf57Q0VDD7 668 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 ORC1Q13415 861 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 RBBP5Q15291 538 aaKnown RBP8.94□□□□□ -0.98
GPC6-202ENST00000617456 E2F5Q15329 346 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 ZNF658Q5TYW1 1059 aaPredicted RBP8.94□□□□□ -0.98
GPC6-202ENST00000617456 CEP135Q66GS9 1140 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 IL27RAQ6UWB1 636 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 HTR3DQ70Z44 454 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 ACOT1Q86TX2 421 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 FAM124AQ86V42 546 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 ZC3H3Q8IXZ2 948 aaKnown RBP8.94□□□□□ -0.98
GPC6-202ENST00000617456 FAM186BQ8IYM0 893 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 FMR1NBQ8N0W7 255 aaPredicted RBP8.94□□□□□ -0.98
GPC6-202ENST00000617456 GALNT15Q8N3T1 639 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 FBXL13Q8NEE6 735 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 JAKMIP2Q96AA8 810 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 NIF3L1Q9GZT8 377 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 MKRN2Q9H000 416 aaKnown RBP8.94□□□□□ -0.98
GPC6-202ENST00000617456 CYLDQ9NQC7 956 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 ITM2CQ9NQX7 267 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 TLR8Q9NR97 1041 aaKnown RBP8.94□□□□□ -0.98
GPC6-202ENST00000617456 ZNF446Q9NWS9 450 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 MARK1Q9P0L2 795 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 USP36Q9P275 1121 aaKnown RBP8.94□□□□□ -0.98
GPC6-202ENST00000617456 CPSF2Q9P2I0 782 aaKnown RBP8.94□□□□□ -0.98
GPC6-202ENST00000617456 NUDT5Q9UKK9 219 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 KIAA1257Q9ULG3 409 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 SCML2Q9UQR0 700 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 COQ4Q9Y3A0 265 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 COMMD10Q9Y6G5 202 aa8.94□□□□□ -0.98
GPC6-202ENST00000617456 CREB3O43889 395 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 BEST1O76090 585 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 TPPPO94811 219 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 ZNF883P0CG24 379 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 EPB41P11171 864 aaKnown RBP8.93□□□□□ -0.98
GPC6-202ENST00000617456 ACADMP11310 421 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 CCDC130P13994 396 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 OXTRP30559 389 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 ATP5C1P36542 298 aaKnown RBP8.93□□□□□ -0.98
GPC6-202ENST00000617456 PIK3CAP42336 1068 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 IL12RB1P42701 662 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 ABCG1P45844 678 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 TPMTP51580 245 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 NDST1P52848 882 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 MAP3K7CLP57077 242 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 CCDC15Q0P6D6 951 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 SUZ12Q15022 739 aaKnown RBP8.93□□□□□ -0.98
GPC6-202ENST00000617456 GEN1Q17RS7 908 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 KIF19Q2TAC6 998 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 C16orf87Q6PH81 154 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 DHRS13Q6UX07 377 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 SRLQ86TD4 932 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 TMPRSS6Q8IU80 811 aa8.93□□□□□ -0.98
GPC6-202ENST00000617456 SCUBE3Q8IX30 993 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms