RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 RIN3Q8TB24 985 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 ATP6V0A1Q93050 837 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 ATP6V1E2Q96A05 226 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 CLIP3Q96DZ5 547 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 APOL2Q9BQE5 337 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 HES2Q9Y543 173 aa13.52□□□□□ -0.25
MSH6-214ENST00000616033 TNFAIP8O95379 198 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 GJB1P08034 283 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 PSMC3P17980 439 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 MGAT1P26572 445 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 AVPR1AP37288 418 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 GBE1Q04446 702 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 HNRNPDQ14103 355 aaKnown RBP13.51□□□□□ -0.25
MSH6-214ENST00000616033 LRRC38Q5VT99 294 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 SLC9A4Q6AI14 798 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 C15orf39Q6ZRI6 1047 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 CLVS1Q8IUQ0 354 aaPredicted RBP13.51□□□□□ -0.25
MSH6-214ENST00000616033 SCYL1Q96KG9 808 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 NDEL1Q9GZM8 345 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 XPNPEP3Q9NQH7 507 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 INIPQ9NRY2 104 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 PAK5Q9P286 719 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 MFHAS1Q9Y4C4 1052 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 PMM2O15305 246 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 DGAT1O75907 488 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 KPNA1P52294 538 aaPredicted RBP13.51□□□□□ -0.25
MSH6-214ENST00000616033 JAK3P52333 1124 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 SNAPC2Q13487 334 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 MBLAC2Q68D91 279 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 LILRA2Q8N149 483 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 LRRC71Q8N4P6 559 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 CCNYL1Q8N7R7 359 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 ACTRT2Q8TDY3 377 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 GAB3Q8WWW8 586 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 NLRP7Q8WX94 980 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 WNK4Q96J92 1243 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 PDCD2LQ9BRP1 358 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 TMEM79Q9BSE2 394 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 PAIP1Q9H074 479 aaKnown RBP13.51□□□□□ -0.25
MSH6-214ENST00000616033 PSMD13Q9UNM6 376 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 UBIAD1Q9Y5Z9 338 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 KLF11O14901 512 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 RGL2O15211 777 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 CCNT2O60583 730 aaKnown RBP13.51□□□□□ -0.25
MSH6-214ENST00000616033 PEX10O60683 326 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 E2F6O75461 281 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 TRUB2O95900 331 aaKnown RBP13.51□□□□□ -0.25
MSH6-214ENST00000616033 ALDOAP04075 364 aaKnown RBP13.51□□□□□ -0.25
MSH6-214ENST00000616033 TFE3P19532 575 aaPredicted RBP13.51□□□□□ -0.25
MSH6-214ENST00000616033 MPSTP25325 297 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 CAP2P40123 477 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 KRT76Q01546 638 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 WDR78Q5VTH9 848 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 PLD6Q8N2A8 252 aaKnown RBP13.51□□□□□ -0.25
MSH6-214ENST00000616033 CIB1Q99828 191 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 NIF3L1Q9GZT8 377 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 NRDE2Q9H7Z3 1164 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 RSAD1Q9HA92 442 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 ANKEF1Q9NU02 776 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 RIPK3Q9Y572 518 aa13.51□□□□□ -0.25
MSH6-214ENST00000616033 SNNO75324 88 aaPredicted RBP13.5□□□□□ -0.25
MSH6-214ENST00000616033 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
MSH6-214ENST00000616033 CRHR1P34998 444 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 HOXD12P35452 270 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 MTTPP55157 894 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 RALGDSQ12967 914 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 LPIN1Q14693 890 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 PCLAFQ15004 111 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 DCLK2Q8N568 766 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 SAMD3Q8N6K7 520 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 MCPH1Q8NEM0 835 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 TSPAN14Q8NG11 270 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 GIPC3Q8TF64 312 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 JADE3Q92613 823 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 TWNKQ96RR1 684 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 CGRRF1Q99675 332 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 SLC4A5Q9BY07 1137 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 ST6GALNAC4Q9H4F1 302 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 PLAC1Q9HBJ0 212 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 ARHGEF37A1IGU5 675 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 APOL1O14791 398 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 STRNO43815 780 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 PENKP01210 267 aaPredicted RBP13.5□□□□□ -0.25
MSH6-214ENST00000616033 SERPINE1P05121 402 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 CPA3P15088 417 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 ABCE1P61221 599 aaKnown RBP13.5□□□□□ -0.25
MSH6-214ENST00000616033 IRF9Q00978 393 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 TUBB3Q13509 450 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 DSELQ8IZU8 1212 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 SLC7A3Q8WY07 619 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 IL1RL2Q9HB29 575 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 TCF7L2Q9NQB0 619 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 RRN3Q9NYV6 651 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 SELENONQ9NZV5 590 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 EMCNQ9ULC0 261 aa13.5□□□□□ -0.25
MSH6-214ENST00000616033 PLIN3O60664 434 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 NR3C2P08235 984 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 HDCP19113 662 aa13.49□□□□□ -0.25
MSH6-214ENST00000616033 TMED10P49755 219 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms