RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 LINC00597Q9H2U6 94 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 ECT2Q9H8V3 914 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 C11orf16Q9NQ32 467 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 WDR35Q9P2L0 1181 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 SFMBT1Q9UHJ3 866 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 NAALADL1Q9UQQ1 740 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 MRPS17Q9Y2R5 130 aaKnown RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 WNT6Q9Y6F9 365 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 PIAS3Q9Y6X2 628 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 MIA3Q5JRA6 1907 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 KANSL1LA0AUZ9 987 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 MIF4GDA9UHW6 222 aaKnown RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 GREM1O60565 184 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 CALB1P05937 261 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 ARSAP15289 507 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 NOS2P35228 1153 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 CARSP49589 748 aaKnown RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 GSCP56915 257 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 RNASE9P60153 205 aaKnown RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 GUCY2DQ02846 1103 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 TAF5Q15542 800 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 TRIP4Q15650 581 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 IER5LQ5T953 404 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 DCAF12L1Q5VU92 463 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 ALS2CLQ60I27 953 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 Q6ZNB5 142 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 SND1Q7KZF4 910 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 ARCQ7LC44 396 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 XYLT1Q86Y38 959 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 PHF13Q86YI8 300 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 UNC45BQ8IWX7 931 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 BBS7Q8IWZ6 715 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 FBXL6Q8N531 539 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 MREGQ8N565 214 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 DQX1Q8TE96 717 aaKnown RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 CASKIN2Q8WXE0 1202 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 WBP2Q969T9 261 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 PIWIL1Q96J94 861 aaKnown RBP9.16□□□□□ -0.94
SMAD4-217ENST00000611848 SLC2A13Q96QE2 648 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 HINFPQ9BQA5 517 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 OSBPL6Q9BZF3 934 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 TBC1D17Q9HA65 648 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 EPB41L5Q9HCM4 733 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 TMEM51Q9NW97 253 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 RRN3Q9NYV6 651 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 ADAM22Q9P0K1 906 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 CTTNBP2NLQ9P2B4 639 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 ADAM21Q9UKJ8 722 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 ALG6Q9Y672 507 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 ZNF318Q5VUA4 2279 aa9.16□□□□□ -0.94
SMAD4-217ENST00000611848 MYO18AQ92614 2054 aaKnown RBP9.15□□□□□ -0.94
SMAD4-217ENST00000611848 ATG2BQ96BY7 2078 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 FAM86C2PA6NEL3 165 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 SPECC1L-ADORA2AF8WAN1 911 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 KRIT1O00522 736 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 DAB1O75553 588 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 GRAP2O75791 330 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 LATS1O95835 1130 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 TRUB2O95900 331 aaKnown RBP9.15□□□□□ -0.94
SMAD4-217ENST00000611848 ADH1CP00326 375 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 PDGFBP01127 241 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-217ENST00000611848 HMBSP08397 361 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 CORO1AP31146 461 aaKnown RBP9.15□□□□□ -0.94
SMAD4-217ENST00000611848 GBP1P32455 592 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 CTHP32929 405 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 GJA4P35212 333 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 CHKAP35790 457 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 HARS2P49590 506 aaKnown RBP9.15□□□□□ -0.94
SMAD4-217ENST00000611848 CLCN5P51795 746 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 TBX4P57082 545 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 RING1Q06587 406 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 CAMK2BQ13554 666 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 DHCR24Q15392 516 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 DCAF6Q58WW2 860 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 FAM102AQ5T9C2 384 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-217ENST00000611848 SYPL2Q5VXT5 272 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 NUGGCQ68CJ6 796 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 ACAD10Q6JQN1 1059 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 MMS22LQ6ZRQ5 1243 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 SUGP1Q8IWZ8 645 aaKnown RBP9.15□□□□□ -0.94
SMAD4-217ENST00000611848 KLHL7Q8IXQ5 586 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 DEFB106AQ8N104 65 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 FLCNQ8NFG4 579 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 TTC8Q8TAM2 541 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 FAM3CQ92520 227 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 CD101Q93033 1021 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 AZIN2Q96A70 460 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 VCPIP1Q96JH7 1222 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 GDAP1L1Q96MZ0 367 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 NAP1L3Q99457 506 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-217ENST00000611848 SH3GL2Q99962 352 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 C11orf70Q9BRQ4 267 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 LRFN3Q9BTN0 628 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 LTB4R2Q9NPC1 389 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMAD4-217ENST00000611848 UVRAGQ9P2Y5 699 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 STAP1Q9ULZ2 295 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 TLR6Q9Y2C9 796 aa9.15□□□□□ -0.94
SMAD4-217ENST00000611848 GOLGA6BA6NDN3 693 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms