RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PCDHA11Q9Y5I1 949 aa14.02□□□□□ -0.16
NEK3-205ENST00000610828 WDR27A2RRH5 827 aa14.02□□□□□ -0.17
NEK3-205ENST00000610828 EDF1O60869 148 aaKnown RBP14.02□□□□□ -0.17
NEK3-205ENST00000610828 SNRPAP09012 282 aaKnown RBP14.02□□□□□ -0.17
NEK3-205ENST00000610828 CSH1P0DML2 217 aa14.02□□□□□ -0.17
NEK3-205ENST00000610828 CSH2P0DML3 217 aa14.02□□□□□ -0.17
NEK3-205ENST00000610828 SKIP12755 728 aa14.02□□□□□ -0.17
NEK3-205ENST00000610828 SESN2P58004 480 aaPredicted RBP14.02□□□□□ -0.17
NEK3-205ENST00000610828 SP3Q02447 781 aa14.02□□□□□ -0.17
NEK3-205ENST00000610828 TRIM71Q2Q1W2 868 aaKnown RBP14.02□□□□□ -0.17
NEK3-205ENST00000610828 LGSNQ5TDP6 509 aa14.02□□□□□ -0.17
NEK3-205ENST00000610828 PID1Q7Z2X4 250 aa14.02□□□□□ -0.17
NEK3-205ENST00000610828 THEM5Q8N1Q8 247 aa14.02□□□□□ -0.17
NEK3-205ENST00000610828 STAMBPL1Q96FJ0 436 aa14.02□□□□□ -0.17
NEK3-205ENST00000610828 ALG13Q9NP73 1137 aaKnown RBP14.02□□□□□ -0.17
NEK3-205ENST00000610828 OR12D3Q9UGF7 316 aa14.02□□□□□ -0.17
NEK3-205ENST00000610828 ZNF180Q9UJW8 692 aa14.02□□□□□ -0.17
NEK3-205ENST00000610828 SNX10Q9Y5X0 201 aa14.02□□□□□ -0.17
NEK3-205ENST00000610828 CASP8AP2Q9UKL3 1982 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.01□□□□□ -0.17
NEK3-205ENST00000610828 ACLYP53396 1101 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 TSPY1Q01534 308 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 SLC18A2Q05940 514 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 MGAT5Q09328 741 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 BMPR2Q13873 1038 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 PARP6Q2NL67 630 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 PM20D1Q6GTS8 502 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 LRRC8BQ6P9F7 803 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 SH2D5Q6ZV89 423 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 TAC4Q86UU9 113 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 FITM2Q8N6M3 262 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 SCAMP5Q8TAC9 235 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 IRGQQ8WZA9 623 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 UROC1Q96N76 676 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 FAM111AQ96PZ2 611 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 PKMYT1Q99640 499 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 EPAS1Q99814 870 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 IQCGQ9H095 443 aaKnown RBP14.01□□□□□ -0.17
NEK3-205ENST00000610828 HAUS2Q9NVX0 235 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 TMEM51Q9NW97 253 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 KLHL8Q9P2G9 620 aaPredicted RBP14.01□□□□□ -0.17
NEK3-205ENST00000610828 SDR42E2A6NKP2 422 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 GSTA1P08263 222 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 MLNP12872 115 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 EPHB2P29323 1055 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 CXCR3P49682 368 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 FAM26DQ5JW98 314 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 DCLRE1AQ6PJP8 1040 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 ZNF598Q86UK7 904 aaKnown RBP14.01□□□□□ -0.17
NEK3-205ENST00000610828 NPWQ8N729 165 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 GBP7Q8N8V2 638 aaPredicted RBP14.01□□□□□ -0.17
NEK3-205ENST00000610828 DEPDC1BQ8WUY9 529 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 SUSD3Q96L08 255 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 RXFP1Q9HBX9 757 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 SLC40A1Q9NP59 571 aa14.01□□□□□ -0.17
NEK3-205ENST00000610828 EIF2B3Q9NR50 452 aaKnown RBP14.01□□□□□ -0.17
NEK3-205ENST00000610828 FAM159BA6NKW6 160 aa14□□□□□ -0.17
NEK3-205ENST00000610828 COPEO14579 308 aa14□□□□□ -0.17
NEK3-205ENST00000610828 AOC2O75106 756 aa14□□□□□ -0.17
NEK3-205ENST00000610828 DNAJC8O75937 253 aaPredicted RBP14□□□□□ -0.17
NEK3-205ENST00000610828 KRT38O76015 456 aa14□□□□□ -0.17
NEK3-205ENST00000610828 CKBP12277 381 aa14□□□□□ -0.17
NEK3-205ENST00000610828 MGAT1P26572 445 aa14□□□□□ -0.17
NEK3-205ENST00000610828 HCAR3P49019 387 aa14□□□□□ -0.17
NEK3-205ENST00000610828 NEK3P51956 506 aa14□□□□□ -0.17
NEK3-205ENST00000610828 YWHAHQ04917 246 aaPredicted RBP14□□□□□ -0.17
NEK3-205ENST00000610828 MAPRE1Q15691 268 aaKnown RBP14□□□□□ -0.17
NEK3-205ENST00000610828 RNF43Q68DV7 783 aa14□□□□□ -0.17
NEK3-205ENST00000610828 SPATA2LQ8IUW3 424 aaPredicted RBP14□□□□□ -0.17
NEK3-205ENST00000610828 UNC5BQ8IZJ1 945 aa14□□□□□ -0.17
NEK3-205ENST00000610828 SMC1BQ8NDV3 1235 aa14□□□□□ -0.17
NEK3-205ENST00000610828 TTC17Q96AE7 1141 aa14□□□□□ -0.17
NEK3-205ENST00000610828 AGAP3Q96P47 875 aa14□□□□□ -0.17
NEK3-205ENST00000610828 VPS11Q9H270 941 aa14□□□□□ -0.17
NEK3-205ENST00000610828 NCAM2O15394 837 aa14□□□□□ -0.17
NEK3-205ENST00000610828 LRIG2O94898 1065 aa14□□□□□ -0.17
NEK3-205ENST00000610828 ALADP13716 330 aa14□□□□□ -0.17
NEK3-205ENST00000610828 PTPN3P26045 913 aa14□□□□□ -0.17
NEK3-205ENST00000610828 MROH9Q5TGP6 573 aa14□□□□□ -0.17
NEK3-205ENST00000610828 GLB1LQ6UWU2 654 aa14□□□□□ -0.17
NEK3-205ENST00000610828 OTOAQ7RTW8 1153 aa14□□□□□ -0.17
NEK3-205ENST00000610828 ZNF276Q8N554 614 aa14□□□□□ -0.17
NEK3-205ENST00000610828 DQX1Q8TE96 717 aaKnown RBP14□□□□□ -0.17
NEK3-205ENST00000610828 GLT1D1Q96MS3 346 aa14□□□□□ -0.17
NEK3-205ENST00000610828 SRPK1Q96SB4 655 aaKnown RBP14□□□□□ -0.17
NEK3-205ENST00000610828 TRPV6Q9H1D0 765 aa14□□□□□ -0.17
NEK3-205ENST00000610828 MANSC1Q9H8J5 431 aa14□□□□□ -0.17
NEK3-205ENST00000610828 IGSF9Q9P2J2 1179 aa14□□□□□ -0.17
NEK3-205ENST00000610828 RAD54BQ9Y620 910 aa14□□□□□ -0.17
NEK3-205ENST00000610828 THSD7BQ9C0I4 1608 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 ARHGEF37A1IGU5 675 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 B4GALT3O60512 393 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 CABYRO75952 493 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 OR4Q2P0C623 313 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 NEFHP12036 1026 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 SERPINB6P35237 376 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 GRIK1P39086 918 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 ETV4P43268 484 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 PPIDQ08752 370 aaKnown RBP13.99□□□□□ -0.17
NEK3-205ENST00000610828 OLIG2Q13516 323 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms