RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 ZCCHC9Q8N567 271 aaKnown RBP12.7□□□□□ -0.38
TP53-219ENST00000610538 ZNF461Q8TAF7 563 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 EPS8L3Q8TE67 593 aaKnown RBP12.7□□□□□ -0.38
TP53-219ENST00000610538 ETNK1Q9HBU6 452 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 IL23AQ9NPF7 189 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 MYO9BQ13459 2157 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 BCLAF3A2AJT9 711 aaKnown RBP12.7□□□□□ -0.38
TP53-219ENST00000610538 GOLGA6L10A6NI86 522 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 SLC38A8A6NNN8 435 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 SCAMP3O14828 347 aaKnown RBP12.7□□□□□ -0.38
TP53-219ENST00000610538 HPDP32754 393 aaPredicted RBP12.7□□□□□ -0.38
TP53-219ENST00000610538 GLUD2P49448 558 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 EIF4EBP2Q13542 120 aaPredicted RBP12.7□□□□□ -0.38
TP53-219ENST00000610538 MORF4L2Q15014 288 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 VSIG1Q86XK7 387 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 PPIL6Q8IXY8 311 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 RNF168Q8IYW5 571 aaPredicted RBP12.7□□□□□ -0.38
TP53-219ENST00000610538 NAT8LQ8N9F0 302 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 HTR3CQ8WXA8 447 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 P2RY11Q96G91 374 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 EPAS1Q99814 870 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 TLR8Q9NR97 1041 aaKnown RBP12.7□□□□□ -0.38
TP53-219ENST00000610538 NINJ2Q9NZG7 142 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 VANGL2Q9ULK5 521 aa12.7□□□□□ -0.38
TP53-219ENST00000610538 FARP1Q9Y4F1 1045 aaPredicted RBP12.7□□□□□ -0.38
TP53-219ENST00000610538 LCHNA4D1U4 455 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 PRRG1O14668 218 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 TLR5O60602 858 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 TTC4O95801 387 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 LMAN1P49257 510 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 SLC20A2Q08357 652 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 HIF1AQ16665 826 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 BBS9Q3SYG4 887 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 SPRED2Q7Z698 418 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.69□□□□□ -0.38
TP53-219ENST00000610538 MARCH2Q9P0N8 246 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 RCOR3Q9P2K3 495 aaPredicted RBP12.69□□□□□ -0.38
TP53-219ENST00000610538 ZMYND8Q9ULU4 1186 aaPredicted RBP12.69□□□□□ -0.38
TP53-219ENST00000610538 TRANK1O15050 2925 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 COL4A6Q14031 1691 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 SLC12A8A0AV02 714 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 ZNF487B1APH4 448 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 GJB5O95377 273 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 URODP06132 367 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 TUBP50607 506 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 TBX4P57082 545 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 RPL10AP62906 217 aaKnown RBP12.69□□□□□ -0.38
TP53-219ENST00000610538 DSG1Q02413 1049 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 TAF12Q16514 161 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 TFAP2DQ7Z6R9 452 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 OLFM3Q96PB7 478 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 TRIM62Q9BVG3 475 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 NACA2Q9H009 215 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 ALG13Q9NP73 1137 aaKnown RBP12.69□□□□□ -0.38
TP53-219ENST00000610538 NOVA2Q9UNW9 492 aaKnown RBP12.69□□□□□ -0.38
TP53-219ENST00000610538 HS3ST4Q9Y661 456 aa12.69□□□□□ -0.38
TP53-219ENST00000610538 DFFAO00273 331 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 FGF18O76093 207 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 RTN3O95197 1032 aaPredicted RBP12.68□□□□□ -0.38
TP53-219ENST00000610538 GRIA1P42261 906 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 IRAK1P51617 712 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 KCNQ1P51787 676 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 ARHGAP36Q6ZRI8 547 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 CDKL3Q8IVW4 592 aaPredicted RBP12.68□□□□□ -0.38
TP53-219ENST00000610538 SERPINB11Q96P15 392 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 TMBIM4Q9HC24 238 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 ARHGEF38Q9NXL2 777 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 IL37Q9NZH6 218 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 CTNNAL1Q9UBT7 734 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 TBK1Q9UHD2 729 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 BACE2Q9Y5Z0 518 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 MYO16Q9Y6X6 1858 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 RNF103O00237 685 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 TEX28O15482 410 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 CAPN2P17655 700 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 LAG3P18627 525 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 TUFMP49411 452 aaKnown RBP12.68□□□□□ -0.38
TP53-219ENST00000610538 AIF1P55008 147 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 CCDC38Q502W7 563 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 ANKRD20A2Q5SQ80 823 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 ANKRD20A1Q5TYW2 823 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 PIK3R6Q5UE93 754 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 ANKRD20A3Q5VUR7 823 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 LEKR1Q6ZMV7 388 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 TRMT10CQ7L0Y3 403 aaKnown RBP12.68□□□□□ -0.38
TP53-219ENST00000610538 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 SPATA17Q96L03 361 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 AGAP3Q96P47 875 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 QKIQ96PU8 341 aaKnown RBP eCLIP12.68□□□□□ -0.38
TP53-219ENST00000610538 MRPL17Q9NRX2 175 aaKnown RBP12.68□□□□□ -0.38
TP53-219ENST00000610538 PAK5Q9P286 719 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 AFF4Q9UHB7 1163 aaKnown RBP12.68□□□□□ -0.38
TP53-219ENST00000610538 PCDHB12Q9Y5F1 795 aa12.68□□□□□ -0.38
TP53-219ENST00000610538 GOLGA6L7A0A1B0GV03 622 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 FAM92AA1XBS5 289 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 KCNU1A8MYU2 1149 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 GOLGA8KD6RF30 607 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 SSTR1P30872 391 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 ALDH1A3P47895 512 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms