RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 CCDC183Q5T5S1 534 aa19.3■□□□□ 0.68
NECAB3-220ENST00000606699 ARHGAP17Q68EM7 881 aa19.3■□□□□ 0.68
NECAB3-220ENST00000606699 RBM43Q6ZSC3 357 aaKnown RBP19.3■□□□□ 0.68
NECAB3-220ENST00000606699 KIAA0907Q7Z7F0 614 aaPredicted RBP19.3■□□□□ 0.68
NECAB3-220ENST00000606699 PIGZQ86VD9 579 aa19.3■□□□□ 0.68
NECAB3-220ENST00000606699 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.3■□□□□ 0.68
NECAB3-220ENST00000606699 ANKRD52Q8NB46 1076 aa19.3■□□□□ 0.68
NECAB3-220ENST00000606699 GOLGA1Q92805 767 aa19.3■□□□□ 0.68
NECAB3-220ENST00000606699 TMEM176AQ96HP8 235 aa19.3■□□□□ 0.68
NECAB3-220ENST00000606699 SGK2Q9HBY8 427 aa19.3■□□□□ 0.68
NECAB3-220ENST00000606699 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.3■□□□□ 0.68
NECAB3-220ENST00000606699 HBS1LQ9Y450 684 aaKnown RBP19.3■□□□□ 0.68
NECAB3-220ENST00000606699 GOLGA4Q13439 2230 aaKnown RBP19.3■□□□□ 0.68
NECAB3-220ENST00000606699 ASXL3Q9C0F0 2248 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 GOLGA8CPA6NN73 597 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 ZBED1O96006 694 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 DNTTP04053 509 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 ATP5BP06576 529 aaKnown RBP19.29■□□□□ 0.68
NECAB3-220ENST00000606699 HLA-EP13747 358 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 HLA-FP30511 346 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 BCAT1P54687 386 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 ZNF394Q53GI3 561 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 CACUL1Q86Y37 369 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 MLKLQ8NB16 471 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 SLC4A11Q8NBS3 891 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 BIRC7Q96CA5 298 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 TMA16Q96EY4 203 aaKnown RBP19.29■□□□□ 0.68
NECAB3-220ENST00000606699 ARID3AQ99856 593 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 IRX2Q9BZI1 471 aaPredicted RBP19.29■□□□□ 0.68
NECAB3-220ENST00000606699 MMRN2Q9H8L6 949 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 TMEM8AQ9HCN3 771 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 TMEM63CQ9P1W3 806 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 SUN2Q9UH99 717 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 SLCO1B1Q9Y6L6 691 aa19.29■□□□□ 0.68
NECAB3-220ENST00000606699 GCN1Q92616 2671 aaKnown RBP19.29■□□□□ 0.68
NECAB3-220ENST00000606699 KNTC1P50748 2209 aa19.28■□□□□ 0.68
NECAB3-220ENST00000606699 SLC16A3O15427 465 aaKnown RBP19.28■□□□□ 0.68
NECAB3-220ENST00000606699 DLDP09622 509 aaKnown RBP19.28■□□□□ 0.68
NECAB3-220ENST00000606699 CDK4P11802 303 aa19.28■□□□□ 0.68
NECAB3-220ENST00000606699 TKTL1P51854 596 aa19.28■□□□□ 0.68
NECAB3-220ENST00000606699 TTC31Q49AM3 519 aaPredicted RBP19.28■□□□□ 0.68
NECAB3-220ENST00000606699 ADGRF1Q5T601 910 aa19.28■□□□□ 0.68
NECAB3-220ENST00000606699 KRT39Q6A163 491 aa19.28■□□□□ 0.68
NECAB3-220ENST00000606699 CHST9Q7L1S5 443 aa19.28■□□□□ 0.68
NECAB3-220ENST00000606699 TMPRSS12Q86WS5 348 aa19.28■□□□□ 0.68
NECAB3-220ENST00000606699 AHI1Q8N157 1196 aa19.28■□□□□ 0.68
NECAB3-220ENST00000606699 CISHQ9NSE2 258 aa19.28■□□□□ 0.68
NECAB3-220ENST00000606699 RWDD2AQ9UIY3 292 aa19.28■□□□□ 0.68
NECAB3-220ENST00000606699 SCML1Q9UN30 329 aa19.28■□□□□ 0.68
NECAB3-220ENST00000606699 CTSKP43235 329 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 RAD23BP54727 409 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 RPS14P62263 151 aaKnown RBP19.27■□□□□ 0.68
NECAB3-220ENST00000606699 MPP7Q5T2T1 576 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 FOXR2Q6PJQ5 311 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 ADIPOR2Q86V24 386 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 FMNL3Q8IVF7 1028 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 ZNF557Q8N988 423 aaPredicted RBP19.27■□□□□ 0.68
NECAB3-220ENST00000606699 RNF139Q8WU17 664 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 CYB5D2Q8WUJ1 264 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 CEP63Q96MT8 703 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 BBC3Q96PG8 261 aaPredicted RBP19.27■□□□□ 0.68
NECAB3-220ENST00000606699 MED15Q96RN5 788 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 PRSS16Q9NQE7 514 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 ABCB8Q9NUT2 735 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 GGA2Q9UJY4 613 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 PCDHGA1Q9Y5H4 931 aa19.27■□□□□ 0.68
NECAB3-220ENST00000606699 H0Y8X5 98 aa19.26■□□□□ 0.67
NECAB3-220ENST00000606699 XPO1O14980 1071 aaKnown RBP19.26■□□□□ 0.67
NECAB3-220ENST00000606699 FSBPO95073 299 aa19.26■□□□□ 0.67
NECAB3-220ENST00000606699 RACK1P63244 317 aaKnown RBP19.26■□□□□ 0.67
NECAB3-220ENST00000606699 SFSWAPQ12872 951 aaKnown RBP19.26■□□□□ 0.67
NECAB3-220ENST00000606699 CCDC40Q4G0X9 1142 aa19.26■□□□□ 0.67
NECAB3-220ENST00000606699 DCAF17Q5H9S7 520 aaPredicted RBP19.26■□□□□ 0.67
NECAB3-220ENST00000606699 TCERG1LQ5VWI1 586 aa19.26■□□□□ 0.67
NECAB3-220ENST00000606699 CAVIN1Q6NZI2 390 aaKnown RBP19.26■□□□□ 0.67
NECAB3-220ENST00000606699 USP30Q70CQ3 517 aa19.26■□□□□ 0.67
NECAB3-220ENST00000606699 ADAT2Q7Z6V5 191 aaKnown RBP19.26■□□□□ 0.67
NECAB3-220ENST00000606699 SKA1Q96BD8 255 aa19.26■□□□□ 0.67
NECAB3-220ENST00000606699 SRRTQ9BXP5 876 aaKnown RBP19.26■□□□□ 0.67
NECAB3-220ENST00000606699 ULBP1Q9BZM6 244 aa19.26■□□□□ 0.67
NECAB3-220ENST00000606699 FTSJ1Q9UET6 329 aa19.26■□□□□ 0.67
NECAB3-220ENST00000606699 NCKAP1Q9Y2A7 1128 aa19.26■□□□□ 0.67
NECAB3-220ENST00000606699 VILLO15195 856 aa19.25■□□□□ 0.67
NECAB3-220ENST00000606699 C1SP09871 688 aa19.25■□□□□ 0.67
NECAB3-220ENST00000606699 PABPC1P11940 636 aaKnown RBP19.25■□□□□ 0.67
NECAB3-220ENST00000606699 POLR2EP19388 210 aaKnown RBP19.25■□□□□ 0.67
NECAB3-220ENST00000606699 MBLAC2Q68D91 279 aa19.25■□□□□ 0.67
NECAB3-220ENST00000606699 ZNF776Q68DI1 518 aaPredicted RBP19.25■□□□□ 0.67
NECAB3-220ENST00000606699 BHLHA9Q7RTU4 235 aa19.25■□□□□ 0.67
NECAB3-220ENST00000606699 MARCH9Q86YJ5 346 aa19.25■□□□□ 0.67
NECAB3-220ENST00000606699 SCML4Q8N228 414 aa19.25■□□□□ 0.67
NECAB3-220ENST00000606699 FBXL13Q8NEE6 735 aa19.25■□□□□ 0.67
NECAB3-220ENST00000606699 ORAI3Q9BRQ5 295 aa19.25■□□□□ 0.67
NECAB3-220ENST00000606699 ACE2Q9BYF1 805 aaPredicted RBP19.25■□□□□ 0.67
NECAB3-220ENST00000606699 ABCC13Q9NSE7 274 aa19.25■□□□□ 0.67
NECAB3-220ENST00000606699 RAB20Q9NX57 234 aa19.25■□□□□ 0.67
NECAB3-220ENST00000606699 ARMCX3Q9UH62 379 aaPredicted RBP19.25■□□□□ 0.67
NECAB3-220ENST00000606699 DACH1Q9UI36 760 aa19.25■□□□□ 0.67
NECAB3-220ENST00000606699 NUMA1Q14980 2115 aa19.25■□□□□ 0.67
NECAB3-220ENST00000606699 A0A1B0GTQ1 180 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms