RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 GPT2Q8TD30 523 aa18.78■□□□□ 0.6
CCDC12-208ENST00000603885 PRCCQ92733 491 aaPredicted RBP18.78■□□□□ 0.6
CCDC12-208ENST00000603885 SIPA1Q96FS4 1042 aa18.78■□□□□ 0.6
CCDC12-208ENST00000603885 SLC2A13Q96QE2 648 aa18.78■□□□□ 0.6
CCDC12-208ENST00000603885 SYNCQ9H7C4 482 aa18.78■□□□□ 0.6
CCDC12-208ENST00000603885 FAM204AQ9H8W3 233 aa18.78■□□□□ 0.6
CCDC12-208ENST00000603885 CD93Q9NPY3 652 aa18.78■□□□□ 0.6
CCDC12-208ENST00000603885 TMEM9BQ9NQ34 198 aa18.78■□□□□ 0.6
CCDC12-208ENST00000603885 TMEM74BQ9NUR3 256 aa18.78■□□□□ 0.6
CCDC12-208ENST00000603885 USP36Q9P275 1121 aaKnown RBP18.78■□□□□ 0.6
CCDC12-208ENST00000603885 FHOD1Q9Y613 1164 aa18.78■□□□□ 0.6
CCDC12-208ENST00000603885 CEP192Q8TEP8 1941 aa18.78■□□□□ 0.6
CCDC12-208ENST00000603885 C4orf47A7E2U8 309 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 TM4SF5O14894 197 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 DLDP09622 509 aaKnown RBP18.77■□□□□ 0.6
CCDC12-208ENST00000603885 POLR2EP19388 210 aaKnown RBP18.77■□□□□ 0.6
CCDC12-208ENST00000603885 KCNA4P22459 653 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 CD6P30203 668 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 CD70P32970 193 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 CDK17Q00537 523 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 KCNMA1Q12791 1236 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 CDH18Q13634 790 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 DAB2IPQ5VWQ8 1189 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 OR6B2Q6IFH4 312 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 DPY19L2P1Q6NXN4 242 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 RBM43Q6ZSC3 357 aaKnown RBP18.77■□□□□ 0.6
CCDC12-208ENST00000603885 FAM183BPQ6ZVS7 135 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 RABEPKQ7Z6M1 372 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 CHSY1Q86X52 802 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 DEFB106AQ8N104 65 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 CARNMT1Q8N4J0 409 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 FIBINQ8TAL6 211 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 CEP76Q8TAP6 659 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 BTN2A3PQ96KV6 586 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 HSPA12BQ96MM6 686 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 LSM14BQ9BX40 385 aaKnown RBP18.77■□□□□ 0.6
CCDC12-208ENST00000603885 PDCL3Q9H2J4 239 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 TMEM245Q9H330 911 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 ITM2CQ9NQX7 267 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.77■□□□□ 0.6
CCDC12-208ENST00000603885 SLC12A6Q9UHW9 1150 aa18.77■□□□□ 0.6
CCDC12-208ENST00000603885 XPO7Q9UIA9 1087 aaKnown RBP18.77■□□□□ 0.6
CCDC12-208ENST00000603885 ERBB2P04626 1255 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 CFIP05156 583 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 SLC2A3P11169 496 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 ACADMP11310 421 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 HLA-EP13747 358 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 COPAP53621 1224 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 PITX1P78337 314 aaPredicted RBP18.76■□□□□ 0.59
CCDC12-208ENST00000603885 CAMK2GQ13555 558 aaPredicted RBP18.76■□□□□ 0.59
CCDC12-208ENST00000603885 PTPRNQ16849 979 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 DUOXA1Q1HG43 343 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 PTPN20Q4JDL3 420 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 RAP1GAP2Q684P5 730 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 SLC23A3Q6PIS1 610 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 OLFML1Q6UWY5 402 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 SLC41A1Q8IVJ1 513 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 LGI2Q8N0V4 545 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 CFAP52Q8N1V2 620 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 ATP6V0D2Q8N8Y2 350 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 OR2T3Q8NH03 318 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 FOXJ1Q92949 421 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 MYEOVQ96EZ4 313 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 PLCB1Q9NQ66 1216 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 DDIT4Q9NX09 232 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 TAB2Q9NYJ8 693 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 PI4KAP42356 2102 aa18.76■□□□□ 0.59
CCDC12-208ENST00000603885 MUC22E2RYF6 1773 aaPredicted RBP18.76■□□□□ 0.59
CCDC12-208ENST00000603885 KCNU1A8MYU2 1149 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 GRAP2O75791 330 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 LUC7L3O95232 432 aaKnown RBP18.75■□□□□ 0.59
CCDC12-208ENST00000603885 TPM2P07951 284 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 ADRB1P08588 477 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 UCHL3P15374 230 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 CYP11B1P15538 503 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 ABCB4P21439 1286 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 TACR2P21452 398 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 OXTRP30559 389 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 CCR1P32246 355 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 TPMTP51580 245 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 EIF4EBP2Q13542 120 aaPredicted RBP18.75■□□□□ 0.59
CCDC12-208ENST00000603885 SYCP2LQ5T4T6 812 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 SLC26A9Q7LBE3 791 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 CACUL1Q86Y37 369 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 ZDHHC17Q8IUH5 632 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 ZNF366Q8N895 744 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 TMEM35BQ8NCS4 154 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 RNF34Q969K3 372 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 TOE1Q96GM8 510 aaKnown RBP18.75■□□□□ 0.59
CCDC12-208ENST00000603885 ZNF419Q96HQ0 510 aaPredicted RBP18.75■□□□□ 0.59
CCDC12-208ENST00000603885 LMLNQ96KR4 655 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 NAA15Q9BXJ9 866 aaKnown RBP18.75■□□□□ 0.59
CCDC12-208ENST00000603885 FBRSQ9HAH7 460 aa18.75■□□□□ 0.59
CCDC12-208ENST00000603885 WSB2Q9NYS7 404 aaPredicted RBP18.75■□□□□ 0.59
CCDC12-208ENST00000603885 SYNJ2BP-COX16A0A087WUM0 186 aa18.74■□□□□ 0.59
CCDC12-208ENST00000603885 F5H5T6 163 aa18.74■□□□□ 0.59
CCDC12-208ENST00000603885 H0Y626 953 aa18.74■□□□□ 0.59
CCDC12-208ENST00000603885 CDX4O14627 284 aaPredicted RBP18.74■□□□□ 0.59
CCDC12-208ENST00000603885 DAB1O75553 588 aa18.74■□□□□ 0.59
CCDC12-208ENST00000603885 IGLV3-19P01714 112 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms