RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, human

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-233	ENST00000602421	KLF16	Q9BXK1	252 aa	Predicted RBP	18.51	■□□□□ 0.55
MACF1-233	ENST00000602421	RNF38	Q9H0F5	515 aa		18.51	■□□□□ 0.55
MACF1-233	ENST00000602421	ATXN3L	Q9H3M9	355 aa		18.51	■□□□□ 0.55
MACF1-233	ENST00000602421	CATSPERB	Q9H7T0	1116 aa		18.51	■□□□□ 0.55
MACF1-233	ENST00000602421	ASIC3	Q9UHC3	531 aa		18.51	■□□□□ 0.55
MACF1-233	ENST00000602421	SNX24	Q9Y343	169 aa		18.51	■□□□□ 0.55
MACF1-233	ENST00000602421	MFHAS1	Q9Y4C4	1052 aa		18.51	■□□□□ 0.55
MACF1-233	ENST00000602421		E9PAM4	449 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	FGF10	O15520	208 aa	Predicted RBP	18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	HDC	P19113	662 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	SLC11A2	P49281	568 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	CARS	P49589	748 aa	Known RBP	18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	DRG2	P55039	364 aa	Known RBP	18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	CYP4F8	P98187	520 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	XRCC4	Q13426	336 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	TRIP13	Q15645	432 aa	Predicted RBP	18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	MS4A13	Q5J8X5	152 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	MANEAL	Q5VSG8	457 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	TXNDC8	Q6A555	127 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	ADGRD2	Q7Z7M1	963 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	C14orf80	Q86SX3	495 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	CDKL3	Q8IVW4	592 aa	Predicted RBP	18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	CCDC89	Q8N998	374 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	SEC14L1	Q92503	715 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	TIFA	Q96CG3	184 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	DTL	Q9NZJ0	730 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	HCFC2	Q9Y5Z7	792 aa		18.5	■□□□□ 0.55
MACF1-233	ENST00000602421	CFAP69	A5D8W1	941 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	MFSD11	O43934	449 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	MAP3K6	O95382	1288 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	IFNB1	P01574	187 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	HOXC13	P31276	330 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	STIP1	P31948	543 aa	Known RBP	18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	SERPINB6	P35237	376 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	SLC10A2	Q12908	348 aa	Predicted RBP	18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	AUH	Q13825	339 aa	Known RBP	18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	HLTF	Q14527	1009 aa	Known RBP eCLIP	18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	PDK1	Q15118	436 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	TRADD	Q15628	312 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	DUSP6	Q16828	381 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	RAP1GAP2	Q684P5	730 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	DDX42	Q86XP3	938 aa	Known RBP eCLIP	18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	ARL14EP	Q8N8R7	260 aa	Predicted RBP	18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	EIF1AD	Q8N9N8	165 aa	Known RBP	18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	C10orf88	Q9H8K7	445 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	GKN1	Q9NS71	199 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	ZDHHC7	Q9NXF8	308 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	RAD54B	Q9Y620	910 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421		A0A1W2PRU2	124 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	BCLAF3	A2AJT9	711 aa	Known RBP	18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	EPOP	A6NHQ4	379 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	HACD1	B0YJ81	288 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	ACSL4	O60488	711 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	STC2	O76061	302 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	IRF1	P10914	325 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	ADCY8	P40145	1251 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	NRIP1	P48552	1158 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	CLCN6	P51797	869 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	CHSY1	Q86X52	802 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	LEMD2	Q8NC56	503 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	HNRNPLL	Q8WVV9	542 aa	Known RBP	18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	CYP2S1	Q96SQ9	504 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	PCDH9	Q9HC56	1237 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	ARFGAP3	Q9NP61	516 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	HCFC1R1	Q9NWW0	138 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	SMPD4	Q9NXE4	827 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	PPARGC1A	Q9UBK2	798 aa	Known RBP	18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	VANGL2	Q9ULK5	521 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	NFU1	Q9UMS0	254 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	NEU2	Q9Y3R4	380 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	CLUH	O75153	1309 aa		18.49	■□□□□ 0.55
MACF1-233	ENST00000602421	CEP290	O15078	2479 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	TRAV19	A0A0A6YYK7	116 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	PPP1R12A	O14974	1030 aa	Predicted RBP	18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	OLFM2	O95897	454 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	MYBL2	P10244	700 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	PFKL	P17858	780 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	TACR2	P21452	398 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	CORO1A	P31146	461 aa	Known RBP	18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	RPL21	P46778	160 aa	Known RBP	18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	VPS41	P49754	854 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	EPHA5	P54756	1037 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	SMAD3	P84022	425 aa	Known RBP	18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	CALCOCO2	Q13137	446 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	SLC45A4	Q5BKX6	768 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	ZNF697	Q5TEC3	545 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	B4GALNT4	Q76KP1	1039 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	GSPT2	Q8IYD1	628 aa	Known RBP	18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	ZNF683	Q8IZ20	524 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	MAB21L3	Q8N8X9	362 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	FAM71D	Q8N9W8	422 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	TFB1M	Q8WVM0	346 aa	Known RBP	18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	PPP2R3C	Q969Q6	453 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	AZIN2	Q96A70	460 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	OLFM3	Q96PB7	478 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	QKI	Q96PU8	341 aa	Known RBP eCLIP	18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	SLC22A12	Q96S37	553 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	CDCA3	Q99618	268 aa	Predicted RBP	18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	PRKD2	Q9BZL6	878 aa		18.48	■□□□□ 0.55
MACF1-233	ENST00000602421	DNMT3B	Q9UBC3	853 aa	Known RBP	18.48	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms