RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 DTLQ9NZJ0 730 aa18.57■□□□□ 0.56
VRK3-225ENST00000601912 NEU2Q9Y3R4 380 aa18.57■□□□□ 0.56
VRK3-225ENST00000601912 MTCL1Q9Y4B5 1905 aaKnown RBP18.56■□□□□ 0.56
VRK3-225ENST00000601912 C2orf78A6NCI8 922 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 E9PAM4 449 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 FGF19O95750 216 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 IFNB1P01574 187 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 HNRNPA1P09651 372 aaKnown RBP eCLIP18.56■□□□□ 0.56
VRK3-225ENST00000601912 SLC10A2Q12908 348 aaPredicted RBP18.56■□□□□ 0.56
VRK3-225ENST00000601912 CALCOCO2Q13137 446 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 PDK1Q15118 436 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 TRIP13Q15645 432 aaPredicted RBP18.56■□□□□ 0.56
VRK3-225ENST00000601912 PIK3R6Q5UE93 754 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 MANEALQ5VSG8 457 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 TMC8Q8IU68 726 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 BBOF1Q8ND07 529 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 SLC22A17Q8WUG5 538 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 FERMT1Q9BQL6 677 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 CORO1BQ9BR76 489 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 PCDH9Q9HC56 1237 aa18.56■□□□□ 0.56
VRK3-225ENST00000601912 CLUHO75153 1309 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 BCLAF3A2AJT9 711 aaKnown RBP18.55■□□□□ 0.56
VRK3-225ENST00000601912 SPDYE4A6NLX3 237 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 HACD1B0YJ81 288 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 NCAM2O15394 837 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 MFSD11O43934 449 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 XYLBO75191 536 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 MYBL2P10244 700 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 MBL2P11226 248 aaPredicted RBP18.55■□□□□ 0.56
VRK3-225ENST00000601912 EPCAMP16422 314 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 ITIH2P19823 946 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 HOXC13P31276 330 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 BMP8BP34820 402 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 RPL21P46778 160 aaKnown RBP18.55■□□□□ 0.56
VRK3-225ENST00000601912 SLC11A2P49281 568 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 KCTD19Q17RG1 926 aaPredicted RBP18.55■□□□□ 0.56
VRK3-225ENST00000601912 MS4A13Q5J8X5 152 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 GSPT2Q8IYD1 628 aaKnown RBP18.55■□□□□ 0.56
VRK3-225ENST00000601912 HS6ST3Q8IZP7 471 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 SNF8Q96H20 258 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 LRRC3Q9BY71 257 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 FAM129AQ9BZQ8 928 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 RNF38Q9H0F5 515 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 ATXN3LQ9H3M9 355 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 DONSONQ9NYP3 566 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 WHRNQ9P202 907 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 MFHAS1Q9Y4C4 1052 aa18.55■□□□□ 0.56
VRK3-225ENST00000601912 PPP1R12AO14974 1030 aaPredicted RBP18.54■□□□□ 0.56
VRK3-225ENST00000601912 PER2O15055 1255 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 ZNF189O75820 626 aaPredicted RBP18.54■□□□□ 0.56
VRK3-225ENST00000601912 MAP3K6O95382 1288 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 MYL4P12829 197 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 PTPN2P17706 415 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 HDCP19113 662 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 ACTN2P35609 894 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 VPS41P49754 854 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 KCNQ1P51787 676 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 AUHQ13825 339 aaKnown RBP18.54■□□□□ 0.56
VRK3-225ENST00000601912 SLC45A4Q5BKX6 768 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 EMBQ6PCB8 327 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 GAREM2Q75VX8 874 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 RBM23Q86U06 439 aaKnown RBP18.54■□□□□ 0.56
VRK3-225ENST00000601912 LZTR1Q8N653 840 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 FAM71DQ8N9W8 422 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 TFB1MQ8WVM0 346 aaKnown RBP18.54■□□□□ 0.56
VRK3-225ENST00000601912 LRRC45Q96CN5 670 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 OLFM3Q96PB7 478 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 KLF16Q9BXK1 252 aaPredicted RBP18.54■□□□□ 0.56
VRK3-225ENST00000601912 TLE6Q9H808 572 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 C10orf88Q9H8K7 445 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 PPARGC1AQ9UBK2 798 aaKnown RBP18.54■□□□□ 0.56
VRK3-225ENST00000601912 VANGL2Q9ULK5 521 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 NDC80O14777 642 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 RFPL2O75678 378 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 PFKLP17858 780 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 MX2P20592 715 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 BEND6Q5SZJ8 279 aaPredicted RBP18.54■□□□□ 0.56
VRK3-225ENST00000601912 RAP1GAP2Q684P5 730 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 TXNDC8Q6A555 127 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 TDHQ8IZJ6 230 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 LEMD2Q8NC56 503 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 AENQ8WTP8 325 aaKnown RBP18.54■□□□□ 0.56
VRK3-225ENST00000601912 AZIN2Q96A70 460 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 ZDHHC7Q9NXF8 308 aa18.54■□□□□ 0.56
VRK3-225ENST00000601912 MYO7AQ13402 2215 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 KCNN4O15554 427 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 ACSL4O60488 711 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 STC2O76061 302 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 OLFM2O95897 454 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 RBL1P28749 1068 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 PLTPP55058 493 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 GDF10P55107 478 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 HEATR6Q6AI08 1181 aaKnown RBP18.53■□□□□ 0.56
VRK3-225ENST00000601912 C14orf80Q86SX3 495 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 CHSY1Q86X52 802 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 ARL14EPQ8N8R7 260 aaPredicted RBP18.53■□□□□ 0.56
VRK3-225ENST00000601912 QKIQ96PU8 341 aaKnown RBP eCLIP18.53■□□□□ 0.56
VRK3-225ENST00000601912 ZYG11BQ9C0D3 744 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 BRD8Q9H0E9 1235 aa18.53■□□□□ 0.56
VRK3-225ENST00000601912 USP29Q9HBJ7 922 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms