RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 DCLK1O15075 740 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 ACSL4O60488 711 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 PAPLNO95428 1278 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 ECEL1O95672 775 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 CORO1AP31146 461 aaKnown RBP23.3■■□□□ 1.32
IRF3-228ENST00000601291 HOXC13P31276 330 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 VCPP55072 806 aaKnown RBP23.3■■□□□ 1.32
IRF3-228ENST00000601291 EIF3EP60228 445 aaKnown RBP23.3■■□□□ 1.32
IRF3-228ENST00000601291 NAA30Q147X3 362 aaPredicted RBP23.3■■□□□ 1.32
IRF3-228ENST00000601291 GPR158Q5T848 1215 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 NPNTQ6UXI9 565 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 CHSY1Q86X52 802 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 SLC35B2Q8TB61 432 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 SLCO2A1Q92959 643 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 GKN1Q9NS71 199 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 LMCD1Q9NZU5 365 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 DNPEPQ9ULA0 475 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 CHD7Q9P2D1 2997 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 FAM187AA6NFU0 413 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 GAS8O95995 478 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 SERPINB6P35237 376 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 KCNJ1P48048 391 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 AUHQ13825 339 aaKnown RBP23.29■■□□□ 1.32
IRF3-228ENST00000601291 TEAD2Q15562 447 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 TCEAL5Q5H9L2 206 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 PRSS36Q5K4E3 855 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 RAP1GAP2Q684P5 730 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 TMC5Q6UXY8 1006 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 DENND1CQ8IV53 801 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 EFHBQ8N7U6 833 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 TCEAL4Q96EI5 215 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 ZFRQ96KR1 1074 aaKnown RBP23.29■■□□□ 1.32
IRF3-228ENST00000601291 TASP1Q9H6P5 420 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 ANKZF1Q9H8Y5 726 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 ETNK2Q9NVF9 386 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 VANGL2Q9ULK5 521 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 ZNF148Q9UQR1 794 aa23.29■■□□□ 1.32
IRF3-228ENST00000601291 DRG1Q9Y295 367 aaKnown RBP23.29■■□□□ 1.32
IRF3-228ENST00000601291 RANBP2P49792 3224 aaKnown RBP23.28■■□□□ 1.32
IRF3-228ENST00000601291 TTI1O43156 1089 aa23.28■■□□□ 1.32
IRF3-228ENST00000601291 HEXIM1O94992 359 aaKnown RBP23.28■■□□□ 1.32
IRF3-228ENST00000601291 LATS1O95835 1130 aa23.28■■□□□ 1.32
IRF3-228ENST00000601291 AVPR1AP37288 418 aa23.28■■□□□ 1.32
IRF3-228ENST00000601291 MRPS25P82663 173 aaKnown RBP23.28■■□□□ 1.32
IRF3-228ENST00000601291 HYAL1Q12794 435 aa23.28■■□□□ 1.32
IRF3-228ENST00000601291 PAFAH1B3Q15102 231 aaKnown RBP23.28■■□□□ 1.32
IRF3-228ENST00000601291 SLC5A9Q2M3M2 681 aa23.28■■□□□ 1.32
IRF3-228ENST00000601291 STXBP5Q5T5C0 1151 aa23.28■■□□□ 1.32
IRF3-228ENST00000601291 TMEM184AQ6ZMB5 413 aa23.28■■□□□ 1.32
IRF3-228ENST00000601291 JAMLQ86YT9 394 aa23.28■■□□□ 1.32
IRF3-228ENST00000601291 C12orf76Q8N812 135 aaPredicted RBP23.28■■□□□ 1.32
IRF3-228ENST00000601291 RUBCNQ92622 972 aa23.28■■□□□ 1.32
IRF3-228ENST00000601291 DDX50Q9BQ39 737 aaKnown RBP23.28■■□□□ 1.32
IRF3-228ENST00000601291 SLC46A2Q9BY10 475 aa23.28■■□□□ 1.32
IRF3-228ENST00000601291 PPARGC1AQ9UBK2 798 aaKnown RBP23.28■■□□□ 1.32
IRF3-228ENST00000601291 LSM7Q9UK45 103 aaKnown RBP23.28■■□□□ 1.32
IRF3-228ENST00000601291 NEU3Q9UQ49 428 aa23.28■■□□□ 1.32
IRF3-228ENST00000601291 F5H5T6 163 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 ITGAVP06756 1048 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 RBP3P10745 1247 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 TACR2P21452 398 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 NTHL1P78549 312 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 SLC7A5Q01650 507 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 GBE1Q04446 702 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 OASLQ15646 514 aaKnown RBP23.27■■□□□ 1.32
IRF3-228ENST00000601291 SYDE1Q6ZW31 735 aaPredicted RBP23.27■■□□□ 1.32
IRF3-228ENST00000601291 GSTA5Q7RTV2 222 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 C14orf80Q86SX3 495 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 DDX42Q86XP3 938 aaKnown RBP eCLIP23.27■■□□□ 1.32
IRF3-228ENST00000601291 PRMT1Q99873 361 aaKnown RBP23.27■■□□□ 1.32
IRF3-228ENST00000601291 ZYG11BQ9C0D3 744 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 RAB17Q9H0T7 212 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 EPC1Q9H2F5 836 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 DONSONQ9NYP3 566 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 UTP11Q9Y3A2 253 aaKnown RBP23.27■■□□□ 1.32
IRF3-228ENST00000601291 MRPS23Q9Y3D9 190 aaKnown RBP23.27■■□□□ 1.32
IRF3-228ENST00000601291 RAD54BQ9Y620 910 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 TNRC18O15417 2968 aaPredicted RBP23.27■■□□□ 1.32
IRF3-228ENST00000601291 MFSD11O43934 449 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 MOSPD3O75425 235 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 TUBBP07437 444 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 MCM3P25205 808 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 PTGIRP43119 386 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 XRCC4Q13426 336 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 PPP1R7Q15435 360 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 NADSYN1Q6IA69 706 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 ZC3H18Q86VM9 953 aaKnown RBP23.27■■□□□ 1.32
IRF3-228ENST00000601291 CMTM8Q8IZV2 173 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 RPRD1AQ96P16 312 aaPredicted RBP23.27■■□□□ 1.32
IRF3-228ENST00000601291 DTLQ9NZJ0 730 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 ARHGAP26Q9UNA1 814 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 SH3BP1Q9Y3L3 701 aa23.27■■□□□ 1.32
IRF3-228ENST00000601291 IGLV3-10A0A075B6K4 115 aa23.26■■□□□ 1.31
IRF3-228ENST00000601291 H7C0C1 242 aa23.26■■□□□ 1.31
IRF3-228ENST00000601291 NRG2O14511 850 aaPredicted RBP23.26■■□□□ 1.31
IRF3-228ENST00000601291 ATP5OP48047 213 aa23.26■■□□□ 1.31
IRF3-228ENST00000601291 RARS2Q5T160 578 aaKnown RBP23.26■■□□□ 1.31
IRF3-228ENST00000601291 FBXL22Q6P050 247 aa23.26■■□□□ 1.31
IRF3-228ENST00000601291 CDKL3Q8IVW4 592 aaPredicted RBP23.26■■□□□ 1.31
IRF3-228ENST00000601291 ZNF683Q8IZ20 524 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms