RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 MDGA1Q8NFP4 955 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 SLC30A5Q8TAD4 765 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 IPO4Q8TEX9 1081 aaKnown RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 GAB3Q8WWW8 586 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 SYN2Q92777 582 aaPredicted RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 TTC17Q96AE7 1141 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 ALG14Q96F25 216 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 VCPIP1Q96JH7 1222 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 AGPAT1Q99943 283 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 HINFPQ9BQA5 517 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 TMEM245Q9H330 911 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 DDIT4Q9NX09 232 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 ELOVL2Q9NXB9 296 aa9.11□□□□□ -0.95
SSBP4-208ENST00000600628 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.11□□□□□ -0.957e-6■■■■■ 33.6
SSBP4-208ENST00000600628 INTS6Q9UL03 887 aaKnown RBP9.11□□□□□ -0.95
SSBP4-208ENST00000600628 ITIH6Q6UXX5 1313 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 LRRC53A6NM62 1247 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 DRGXA6NNA5 263 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 CAPN9O14815 690 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 ADCY5O95622 1261 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 HNRNPH3P31942 346 aaKnown RBP9.1□□□□□ -0.95
SSBP4-208ENST00000600628 PLK1P53350 603 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 NRG1Q02297 640 aaPredicted RBP9.1□□□□□ -0.95
SSBP4-208ENST00000600628 EOGTQ5NDL2 527 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 BRMS1LQ5PSV4 323 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 ACBD5Q5T8D3 534 aaPredicted RBP9.1□□□□□ -0.95
SSBP4-208ENST00000600628 MANEALQ5VSG8 457 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 LAIR1Q6GTX8 287 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 LRSAM1Q6UWE0 723 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 MMS22LQ6ZRQ5 1243 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 PRR23BQ6ZRT6 265 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 NUDT18Q6ZVK8 323 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 CCDC33Q8N5R6 958 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 ZNF557Q8N988 423 aaPredicted RBP9.1□□□□□ -0.95
SSBP4-208ENST00000600628 KDM1BQ8NB78 822 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 HJURPQ8NCD3 748 aaPredicted RBP9.1□□□□□ -0.95
SSBP4-208ENST00000600628 C3orf20Q8ND61 904 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 WFIKKN2Q8TEU8 576 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 DDI1Q8WTU0 396 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 BHMTQ93088 406 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 LOXL4Q96JB6 756 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 C1orf74Q96LT6 269 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 HHIPQ96QV1 700 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 TBCBQ99426 244 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 NCDNQ9UBB6 729 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 RAB23Q9ULC3 237 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 NENFQ9UMX5 172 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 NEU3Q9UQ49 428 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 OR51B4Q9Y5P0 310 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 NUMA1Q14980 2115 aa9.1□□□□□ -0.95
SSBP4-208ENST00000600628 SIGLEC16A6NMB1 481 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 WASH3PC4AMC7 463 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 M0QYT0 321 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 AXIN1O15169 862 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 TSPAN3O60637 253 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 LRP3O75074 770 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 PAGE1O75459 146 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 RPP40O75818 363 aaKnown RBP9.09□□□□□ -0.95
SSBP4-208ENST00000600628 F9P00740 461 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 IGLV3-19P01714 112 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 APOEP02649 317 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 CYBBP04839 570 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 GYPCP04921 128 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 RETP07949 1114 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 GABRG2P18507 467 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 TACR2P21452 398 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 GBP1P32455 592 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 CD70P32970 193 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 P2RY2P41231 377 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 IL12RB1P42701 662 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 COPAP53621 1224 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 CAMK2GQ13555 558 aaPredicted RBP9.09□□□□□ -0.95
SSBP4-208ENST00000600628 AUHQ13825 339 aaKnown RBP9.09□□□□□ -0.95
SSBP4-208ENST00000600628 LPAL2Q16609 132 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 MAP7D1Q3KQU3 841 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 PLK5Q496M5 336 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 CCDC14Q49A88 953 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 FILIP1LQ4L180 1135 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 RAB6CQ53S08 254 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 FSCBQ5H9T9 825 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 PLA2G2CQ5R387 149 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 FAM102AQ5T9C2 384 aaPredicted RBP9.09□□□□□ -0.95
SSBP4-208ENST00000600628 TTC39BQ5VTQ0 682 aaPredicted RBP9.09□□□□□ -0.95
SSBP4-208ENST00000600628 PLEKHA7Q6IQ23 1121 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 CXorf57Q6NSI4 855 aaKnown RBP9.09□□□□□ -0.95
SSBP4-208ENST00000600628 KIAA1211LQ6NV74 962 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 FBXL22Q6P050 247 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 CEP68Q76N32 757 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 ZNF571Q7Z3V5 609 aaPredicted RBP9.09□□□□□ -0.95
SSBP4-208ENST00000600628 KIAA2013Q8IYS2 634 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 MCOLN2Q8IZK6 566 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 GPR161Q8N6U8 529 aaKnown RBP9.09□□□□□ -0.95
SSBP4-208ENST00000600628 MSANTD4Q8NCY6 345 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 TSTD1Q8NFU3 115 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 JOSD2Q8TAC2 188 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 IGSF8Q969P0 613 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 IQCDQ96DY2 449 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 MRGPRX3Q96LB0 322 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 HAPLN3Q96S86 360 aa9.09□□□□□ -0.95
SSBP4-208ENST00000600628 DDX50Q9BQ39 737 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms