RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 GPRIN1Q7Z2K8 1008 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 KIAA0907Q7Z7F0 614 aaPredicted RBP18.42■□□□□ 0.54
SSBP4-207ENST00000600244 ADIPOR2Q86V24 386 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 CBWD2Q8IUF1 395 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 FAM217AQ8IXS0 508 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 ZC3H3Q8IXZ2 948 aaKnown RBP18.42■□□□□ 0.54
SSBP4-207ENST00000600244 GANCQ8TET4 914 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 FOXD4L4Q8WXT5 416 aaPredicted RBP18.42■□□□□ 0.54
SSBP4-207ENST00000600244 LARP4BQ92615 738 aaKnown RBP18.42■□□□□ 0.54
SSBP4-207ENST00000600244 CCNL2Q96S94 520 aaPredicted RBP18.42■□□□□ 0.54
SSBP4-207ENST00000600244 DCLK3Q9C098 648 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 SUN2Q9UH99 717 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 MAN2B2Q9Y2E5 1009 aa18.42■□□□□ 0.54
SSBP4-207ENST00000600244 MORC2Q9Y6X9 1032 aaPredicted RBP18.42■□□□□ 0.54
SSBP4-207ENST00000600244 ENO4A6NNW6 628 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 HHLA1C9JL84 531 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 KIAA0391O15091 583 aaKnown RBP18.41■□□□□ 0.54
SSBP4-207ENST00000600244 SDC3O75056 442 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 CORO1AP31146 461 aaKnown RBP18.41■□□□□ 0.54
SSBP4-207ENST00000600244 MAP3K7CLP57077 242 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 COG7P83436 770 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 SCD5Q86SK9 330 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 SYCP3Q8IZU3 236 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 OR4C6Q8NH72 309 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 WFIKKN2Q8TEU8 576 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 DDI1Q8WTU0 396 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 USP28Q96RU2 1077 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 XYLT2Q9H1B5 865 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 MTG2Q9H4K7 406 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 TBC1D7Q9P0N9 293 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 PCDHB13Q9Y5F0 798 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 PCDHGA8Q9Y5G5 932 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 CLIC4Q9Y696 253 aa18.41■□□□□ 0.54
SSBP4-207ENST00000600244 ITGB2P05107 769 aa18.4■□□□□ 0.54
SSBP4-207ENST00000600244 DLDP09622 509 aaKnown RBP18.4■□□□□ 0.54
SSBP4-207ENST00000600244 GIMD1P0DJR0 217 aa18.4■□□□□ 0.54
SSBP4-207ENST00000600244 SFTPCP11686 197 aa18.4■□□□□ 0.54
SSBP4-207ENST00000600244 HOXD9P28356 352 aaPredicted RBP18.4■□□□□ 0.54
SSBP4-207ENST00000600244 ZSCAN23Q3MJ62 389 aa18.4■□□□□ 0.54
SSBP4-207ENST00000600244 C3orf38Q5JPI3 329 aa18.4■□□□□ 0.54
SSBP4-207ENST00000600244 CHST9Q7L1S5 443 aa18.4■□□□□ 0.54
SSBP4-207ENST00000600244 IQCHQ86VS3 1027 aa18.4■□□□□ 0.54
SSBP4-207ENST00000600244 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.4■□□□□ 0.54
SSBP4-207ENST00000600244 EXTL1Q92935 676 aa18.4■□□□□ 0.54
SSBP4-207ENST00000600244 TNIP3Q96KP6 325 aa18.4■□□□□ 0.54
SSBP4-207ENST00000600244 ATXN7L1Q9ULK2 861 aaPredicted RBP18.4■□□□□ 0.54
SSBP4-207ENST00000600244 TPX2Q9ULW0 747 aaKnown RBP18.4■□□□□ 0.54
SSBP4-207ENST00000600244 NBASA2RRP1 2371 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 A0A1W2PP55 124 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 LATO43561 262 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 GCNT3O95395 438 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 GP1BAP07359 652 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 CCDC130P13994 396 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 NASPP49321 788 aaPredicted RBP18.39■□□□□ 0.53
SSBP4-207ENST00000600244 INHBCP55103 352 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 SFSWAPQ12872 951 aaKnown RBP18.39■□□□□ 0.53
SSBP4-207ENST00000600244 ATL3Q6DD88 541 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 NAPEPLDQ6IQ20 393 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 CLEC14AQ86T13 490 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 DENND1CQ8IV53 801 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 SMYD3Q9H7B4 428 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 CHMP5Q9NZZ3 219 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 FZD4Q9ULV1 537 aa18.39■□□□□ 0.53
SSBP4-207ENST00000600244 UTP20O75691 2785 aaKnown RBP18.39■□□□□ 0.53
SSBP4-207ENST00000600244 MID1O15344 667 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 BMP15O95972 392 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 HMBSP08397 361 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 FAM87AP0C7U9 286 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 GAP43P17677 238 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 DGKAP23743 735 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 CCR10P46092 362 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 MYL6P60660 151 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 OVGP1Q12889 678 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 CST6Q15828 149 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 TMC6Q7Z403 805 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 TADA2BQ86TJ2 420 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 ACOT1Q86TX2 421 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 SLC2A14Q8TDB8 520 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 GRAMD1AQ96CP6 724 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 DNAJC19Q96DA6 116 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 MYO19Q96H55 970 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 ZNF396Q96N95 335 aaPredicted RBP18.38■□□□□ 0.53
SSBP4-207ENST00000600244 ARHGAP9Q9BRR9 750 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 FGFBP2Q9BYJ0 223 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 OSBPL2Q9H1P3 480 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 OLFML3Q9NRN5 406 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 CLIC5Q9NZA1 410 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 ARHGAP20Q9P2F6 1191 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 NAGPAQ9UK23 515 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 PAXBP1Q9Y5B6 917 aa18.38■□□□□ 0.53
SSBP4-207ENST00000600244 COL27A1Q8IZC6 1860 aaPredicted RBP18.37■□□□□ 0.53
SSBP4-207ENST00000600244 LY6G6EA0A0G2JKS1 128 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 RNASEH2AO75792 299 aaKnown RBP18.37■□□□□ 0.53
SSBP4-207ENST00000600244 ATICP31939 592 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 PSEN1P49768 467 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 DUSP3P51452 185 aaPredicted RBP18.37■□□□□ 0.53
SSBP4-207ENST00000600244 DNM1Q05193 864 aaKnown RBP18.37■□□□□ 0.53
SSBP4-207ENST00000600244 EHHADHQ08426 723 aa18.37■□□□□ 0.53
SSBP4-207ENST00000600244 MAPK8IP2Q13387 824 aaPredicted RBP18.37■□□□□ 0.53
SSBP4-207ENST00000600244 MPPE1Q53F39 396 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms