RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 HPS4Q9NQG7 708 aa19.54■□□□□ 0.72
CCDC9-205ENST00000600117 DUS2Q9NX74 493 aaKnown RBP19.54■□□□□ 0.72
CCDC9-205ENST00000600117 TBC1D14Q9P2M4 693 aa19.54■□□□□ 0.72
CCDC9-205ENST00000600117 IP6K2Q9UHH9 426 aa19.54■□□□□ 0.72
CCDC9-205ENST00000600117 XPO7Q9UIA9 1087 aaKnown RBP19.54■□□□□ 0.72
CCDC9-205ENST00000600117 ZNF510Q9Y2H8 683 aa19.54■□□□□ 0.72
CCDC9-205ENST00000600117 DUSP10Q9Y6W6 482 aa19.54■□□□□ 0.72
CCDC9-205ENST00000600117 MYO1FO00160 1098 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 GFRA2O00451 464 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 SLC9A3R1O14745 358 aaPredicted RBP19.53■□□□□ 0.72
CCDC9-205ENST00000600117 ACSL4O60488 711 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 ARSAP15289 507 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 MAGEA9P43362 315 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 IFNAR2P48551 515 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 PRKCQQ04759 706 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 CSTF1Q05048 431 aaKnown RBP19.53■□□□□ 0.72
CCDC9-205ENST00000600117 PIGHQ14442 188 aaPredicted RBP19.53■□□□□ 0.72
CCDC9-205ENST00000600117 PDGFRLQ15198 375 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 CC2D1AQ6P1N0 951 aaPredicted RBP19.53■□□□□ 0.72
CCDC9-205ENST00000600117 SND1Q7KZF4 910 aaKnown RBP eCLIP19.53■□□□□ 0.72
CCDC9-205ENST00000600117 CPNE8Q86YQ8 564 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 RNF34Q969K3 372 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 OTUB2Q96DC9 234 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 WDCPQ9H6R7 721 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 TMPRSS4Q9NRS4 437 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 ZSCAN32Q9NX65 697 aa19.53■□□□□ 0.72
CCDC9-205ENST00000600117 SMG5Q9UPR3 1016 aaKnown RBP19.53■□□□□ 0.72
CCDC9-205ENST00000600117 COL4A3Q01955 1670 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 LRCH4O75427 683 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 PROSCO94903 275 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 MOCS2O96007 188 aaPredicted RBP19.52■□□□□ 0.72
CCDC9-205ENST00000600117 TNK2Q07912 1038 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 ACAP1Q15027 740 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 MLF2Q15773 248 aaPredicted RBP19.52■□□□□ 0.72
CCDC9-205ENST00000600117 FAM133BQ5BKY9 247 aaKnown RBP19.52■□□□□ 0.72
CCDC9-205ENST00000600117 DAB2IPQ5VWQ8 1189 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 CYP4V2Q6ZWL3 525 aaPredicted RBP19.52■□□□□ 0.72
CCDC9-205ENST00000600117 ADGRG2Q8IZP9 1017 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 ATP6V0D2Q8N8Y2 350 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 NELL1Q92832 810 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 BTN2A3PQ96KV6 586 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 TKTL2Q9H0I9 626 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 BRD9Q9H8M2 597 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 TRIM10Q9UDY6 481 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 PAXBP1Q9Y5B6 917 aa19.52■□□□□ 0.72
CCDC9-205ENST00000600117 GOLGA6L7A0A1B0GV03 622 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 DCDC2BA2VCK2 349 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 LILRB5O75023 590 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 PAGE1O75459 146 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 ADRB1P08588 477 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 SLC6A4P31645 630 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 ADRA1BP35368 520 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 ARHGAP25P42331 645 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 SLC11A2P49281 568 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 PIK3R6Q5UE93 754 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 TXLNBQ8N3L3 684 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 CPXM2Q8N436 756 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 CCDC185Q8N715 623 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 NTAN1Q96AB6 310 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 P2RY11Q96G91 374 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 PEBP4Q96S96 227 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 PRMT1Q99873 361 aaKnown RBP19.51■□□□□ 0.71
CCDC9-205ENST00000600117 EBF3Q9H4W6 596 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 TRPV5Q9NQA5 729 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 LCMT1Q9UIC8 334 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 F5P12259 2224 aa19.51■□□□□ 0.71
CCDC9-205ENST00000600117 FRYQ5TBA9 3013 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 OTOL1A6NHN0 477 aaPredicted RBP19.5■□□□□ 0.71
CCDC9-205ENST00000600117 FAM170BA6NMN3 283 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 RNF8O76064 485 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 CYP17A1P05093 508 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 CCDC175P0C221 793 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 TCF4P15884 667 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 DESP17661 470 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 TGM1P22735 817 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 MIPP30301 263 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 MAN1A1P33908 653 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 PCK1P35558 622 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 NOP2P46087 812 aaKnown RBP19.5■□□□□ 0.71
CCDC9-205ENST00000600117 KIF5AQ12840 1032 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 MTA1Q13330 715 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 MESDQ14696 234 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 UBXN2BQ14CS0 331 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 SLC44A4Q53GD3 710 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 MS4A13Q5J8X5 152 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 ARTNQ5T4W7 220 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 ADGRF1Q5T601 910 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 SCYL2Q6P3W7 929 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 RHBDF2Q6PJF5 856 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 ZNF662Q6ZS27 426 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 TPCN2Q8NHX9 752 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 DNASE1L2Q92874 299 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 IRF7Q92985 503 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 ATP2A3Q93084 1043 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 MYEOVQ96EZ4 313 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 NCAPGQ9BPX3 1015 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 SLC12A6Q9UHW9 1150 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 USP18Q9UMW8 372 aa19.5■□□□□ 0.71
CCDC9-205ENST00000600117 MTF2Q9Y483 593 aaPredicted RBP19.5■□□□□ 0.71
CCDC9-205ENST00000600117 TICRRQ7Z2Z1 1910 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms