RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 POLR1BQ9H9Y6 1135 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 PRKAG3Q9UGI9 489 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 RNASEH1O60930 286 aaKnown RBP12.09□□□□□ -0.47
SCN8A-208ENST00000599343 FBXO21O94952 628 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 IL6P05231 212 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 TAL1P17542 331 aaPredicted RBP12.09□□□□□ -0.47
SCN8A-208ENST00000599343 PAICSP22234 425 aaKnown RBP12.09□□□□□ -0.47
SCN8A-208ENST00000599343 CCR1P32246 355 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 CNGA2Q16280 664 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 ERO1BQ86YB8 467 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 RNASE11Q8TAA1 199 aaKnown RBP12.09□□□□□ -0.47
SCN8A-208ENST00000599343 ATXN3LQ9H3M9 355 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 CETPP11597 493 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 PABPC1P11940 636 aaKnown RBP12.08□□□□□ -0.47
SCN8A-208ENST00000599343 ETS1P14921 441 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 PGAM1P18669 254 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 MYL12AP19105 171 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 CYP2A7P20853 494 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 GARTP22102 1010 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 TGM3Q08188 693 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 CCNIQ14094 377 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 ZNF484Q5JVG2 852 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 RD3Q7Z3Z2 195 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 HERC6Q8IVU3 1022 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 ARHGEF19Q8IW93 802 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 PYDC1Q8WXC3 89 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 APBA2Q99767 749 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 ADI1Q9BV57 179 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 GRIP2Q9C0E4 1043 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 POLE3Q9NRF9 147 aa12.08□□□□□ -0.47
SCN8A-208ENST00000599343 PSMD12O00232 456 aaPredicted RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 IFRD1O00458 451 aaPredicted RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 DCXO43602 365 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 NRF1Q16656 503 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 RNF180Q86T96 592 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 CD302Q8IX05 232 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 FAM126BQ8IXS8 530 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 THAP1Q9NVV9 213 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 A0A096LPK6 155 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 RAD51BO15315 384 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 LSM8O95777 96 aaKnown RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 AMPD1P23109 780 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 FAAP100Q0VG06 881 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 DGCR6Q14129 220 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 EML3Q32P44 896 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 ZNF470Q6ECI4 717 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 ZNF605Q86T29 641 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 MARK4Q96L34 752 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 BCL2L14Q9BZR8 327 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 RAD21L1Q9H4I0 556 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 VTI1BQ9UEU0 232 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 TPRKBQ9Y3C4 175 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 EFCAB10A6NFE3 127 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 CES2O00748 559 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 SYNCRIPO60506 623 aaKnown RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 UMPSP11172 480 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 VAV1P15498 845 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 SRP54P61011 504 aaKnown RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 PPATQ06203 517 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 MARC1Q5VT66 337 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 MCOLN2Q8IZK6 566 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 ITFG1Q8TB96 612 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 MTMR8Q96EF0 704 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 ZFRQ96KR1 1074 aaKnown RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 BTBD7Q9P203 1132 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 POLR1DQ9Y2S0 133 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 STON1Q9Y6Q2 735 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 A8MX80 341 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 NUDT14O95848 222 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 PECAM1P16284 738 aaPredicted RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 ACAT1P24752 427 aaKnown RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 DNAJB2P25686 324 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 MAD2L1Q13257 205 aaPredicted RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 KLHL24Q6TFL4 600 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 ZNF720Q7Z2F6 126 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 TMC3Q7Z5M5 1100 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 MILR1Q7Z6M3 343 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 BHLHE22Q8NFJ8 381 aaPredicted RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 GTF3C2Q8WUA4 911 aaPredicted RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 HDAC7Q8WUI4 952 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 ZNF75CPQ92670 426 aaPredicted RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 USP7Q93009 1102 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 AAASQ9NRG9 546 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 ADPRHL2Q9NX46 363 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 DDX43Q9NXZ2 648 aaKnown RBP12.08□□□□□ -0.48
SCN8A-208ENST00000599343 SNTG2Q9NY99 539 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 TSPOAP1O95153 1857 aa12.08□□□□□ -0.48
SCN8A-208ENST00000599343 TNS3Q68CZ2 1445 aa12.07□□□□□ -0.48
SCN8A-208ENST00000599343 THP07101 528 aa12.07□□□□□ -0.48
SCN8A-208ENST00000599343 GP5P40197 560 aa12.07□□□□□ -0.48
SCN8A-208ENST00000599343 ZNF844Q08AG5 666 aa12.07□□□□□ -0.48
SCN8A-208ENST00000599343 ADIGQ0VDE8 80 aa12.07□□□□□ -0.48
SCN8A-208ENST00000599343 TROAPQ12815 778 aa12.07□□□□□ -0.48
SCN8A-208ENST00000599343 NDUFA5Q16718 116 aa12.07□□□□□ -0.48
SCN8A-208ENST00000599343 ATAD3BQ5T9A4 648 aa12.07□□□□□ -0.48
SCN8A-208ENST00000599343 ADAM32Q8TC27 787 aa12.07□□□□□ -0.48
SCN8A-208ENST00000599343 CPNE1Q99829 537 aa12.07□□□□□ -0.48
SCN8A-208ENST00000599343 SLC9A8Q9Y2E8 581 aa12.07□□□□□ -0.48
SCN8A-208ENST00000599343 GPR75-ASB3A0A0A6YYF3 556 aa12.07□□□□□ -0.48
SCN8A-208ENST00000599343 VAPBO95292 243 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms