RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PRDM16Q9HAZ2 1276 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 POPDC2Q9HBU9 364 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 TAB2Q9NYJ8 693 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 DACH1Q9UI36 760 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 FHOD1Q9Y613 1164 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 PLXND1Q9Y4D7 1925 aa14.27□□□□□ -0.12
SCAF1-203ENST00000598359 TNRC6BQ9UPQ9 1833 aaKnown RBP14.27□□□□□ -0.12
SCAF1-203ENST00000598359 AP5Z1O43299 807 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 SYNCRIPO60506 623 aaKnown RBP14.27□□□□□ -0.13
SCAF1-203ENST00000598359 TRUB2O95900 331 aaKnown RBP14.27□□□□□ -0.13
SCAF1-203ENST00000598359 ERBB2P04626 1255 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 PABPC1P11940 636 aaKnown RBP14.27□□□□□ -0.13
SCAF1-203ENST00000598359 COPAP53621 1224 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 PTK2Q05397 1052 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 DRAP1Q14919 205 aaPredicted RBP14.27□□□□□ -0.13
SCAF1-203ENST00000598359 DCAF6Q58WW2 860 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 TCP11X2Q5H9J9 407 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 RAP1GAP2Q684P5 730 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 MBLAC2Q68D91 279 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 OR6B2Q6IFH4 312 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 SLC36A4Q6YBV0 504 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 FAM183BPQ6ZVS7 135 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 TMPRSS6Q8IU80 811 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 SYT12Q8IV01 421 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 MFN1Q8IWA4 741 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 DEFB106AQ8N104 65 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 CARNMT1Q8N4J0 409 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 HJURPQ8NCD3 748 aaPredicted RBP14.27□□□□□ -0.13
SCAF1-203ENST00000598359 ANP32BQ92688 251 aaKnown RBP14.27□□□□□ -0.13
SCAF1-203ENST00000598359 HSPA12BQ96MM6 686 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 LSM14BQ9BX40 385 aaKnown RBP14.27□□□□□ -0.13
SCAF1-203ENST00000598359 MTG2Q9H4K7 406 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 PILRBQ9UKJ0 227 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 PCDHGC3Q9UN70 934 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 NFE2L3Q9Y4A8 694 aa14.27□□□□□ -0.13
SCAF1-203ENST00000598359 ZZEF1O43149 2961 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 CDX4O14627 284 aaPredicted RBP14.26□□□□□ -0.13
SCAF1-203ENST00000598359 NPC1O15118 1278 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 IRAK2O43187 625 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 TIMM44O43615 452 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 ZNF217O75362 1048 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 IGLV3-25P01717 112 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 CFIP05156 583 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 KRT9P35527 623 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 MAPK8P45983 427 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 KLK7P49862 253 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 ZNF33AQ06730 810 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 LMAN2Q12907 356 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 ACAP1Q15027 740 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 PTPRNQ16849 979 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 PTPN20Q4JDL3 420 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 FSCBQ5H9T9 825 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 MS4A13Q5J8X5 152 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 KLHDC7AQ5VTJ3 777 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 TAF3Q5VWG9 929 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 KIAA0907Q7Z7F0 614 aaPredicted RBP14.26□□□□□ -0.13
SCAF1-203ENST00000598359 FAM124AQ86V42 546 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 CHSY1Q86X52 802 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 CIR1Q86X95 450 aaPredicted RBP14.26□□□□□ -0.13
SCAF1-203ENST00000598359 FAM71AQ8IYT1 594 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 LGI2Q8N0V4 545 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.26□□□□□ -0.13
SCAF1-203ENST00000598359 WFIKKN2Q8TEU8 576 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 AZIN2Q96A70 460 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 SIPA1Q96FS4 1042 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 TOE1Q96GM8 510 aaKnown RBP14.26□□□□□ -0.13
SCAF1-203ENST00000598359 LMLNQ96KR4 655 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 VPS16Q9H269 839 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 FAM204AQ9H8W3 233 aa14.26□□□□□ -0.13
SCAF1-203ENST00000598359 INTS6Q9UL03 887 aaKnown RBP14.26□□□□□ -0.13
SCAF1-203ENST00000598359 MUC22E2RYF6 1773 aaPredicted RBP14.26□□□□□ -0.13
SCAF1-203ENST00000598359 NDUFS2O75306 463 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 APOEP02649 317 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 HOXB3P14651 431 aaPredicted RBP14.25□□□□□ -0.13
SCAF1-203ENST00000598359 POLR2EP19388 210 aaKnown RBP14.25□□□□□ -0.13
SCAF1-203ENST00000598359 TACR2P21452 398 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 MAOBP27338 520 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 TPMTP51580 245 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 NNTQ13423 1086 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 UAP1L1Q3KQV9 507 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 SPDYCQ5MJ68 293 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 OLFML1Q6UWY5 402 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 C11orf57Q6ZUT1 292 aaPredicted RBP14.25□□□□□ -0.13
SCAF1-203ENST00000598359 BEND5Q7L4P6 421 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 AHI1Q8N157 1196 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 PRCCQ92733 491 aaPredicted RBP14.25□□□□□ -0.13
SCAF1-203ENST00000598359 SLC2A13Q96QE2 648 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 LHX5Q9H2C1 402 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 TMEM245Q9H330 911 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 TMEM9BQ9NQ34 198 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 DDIT4Q9NX09 232 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 USP36Q9P275 1121 aaKnown RBP14.25□□□□□ -0.13
SCAF1-203ENST00000598359 ANGPTL2Q9UKU9 493 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 PLA2G4CQ9UP65 541 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 SPEGQ15772 3267 aa14.25□□□□□ -0.13
SCAF1-203ENST00000598359 ZFYVE26Q68DK2 2539 aa14.24□□□□□ -0.13
SCAF1-203ENST00000598359 CEP295Q9C0D2 2601 aa14.24□□□□□ -0.13
SCAF1-203ENST00000598359 GIPC1O14908 333 aa14.24□□□□□ -0.13
SCAF1-203ENST00000598359 DLDP09622 509 aaKnown RBP14.24□□□□□ -0.13
SCAF1-203ENST00000598359 ENGP17813 658 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms