RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 OR6Y1Q8NGX8 325 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 OPTNQ96CV9 577 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 ZNF778Q96MU6 729 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 GPR20Q99678 358 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 KLK14Q9P0G3 267 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 PIM2Q9P1W9 311 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 A0A088AWK7 358 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 C19orf81C9J6K1 198 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 ABLIM1O14639 778 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 CD1EP15812 388 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 HMGB2P26583 209 aaKnown RBP15.68■□□□□ 0.1
UPF1-204ENST00000596842 AVPR1AP37288 418 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 CCR10P46092 362 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 BTKQ06187 659 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 GALNT4Q8N4A0 578 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 DNERQ8NFT8 737 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 SCYL1Q96KG9 808 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 BCO2Q9BYV7 579 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 SYBUQ9NX95 663 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 CLIC5Q9NZA1 410 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 KLHL8Q9P2G9 620 aaPredicted RBP15.68■□□□□ 0.1
UPF1-204ENST00000596842 TRDMT1O14717 391 aaKnown RBP15.68■□□□□ 0.1
UPF1-204ENST00000596842 PRKCHP24723 683 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 NUDT2P50583 147 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 OAZ1P54368 228 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 PKNOX1P55347 436 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 MBTD1Q05BQ5 628 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 DLG1Q12959 904 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 STILQ15468 1287 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 PACS1Q6VY07 963 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 KDELC2Q7Z4H8 507 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 SPNS2Q8IVW8 549 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 ARHGAP18Q8N392 663 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 TRPM4Q8TD43 1214 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 HTR3CQ8WXA8 447 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 PCDHA11Q9Y5I1 949 aa15.68■□□□□ 0.1
UPF1-204ENST00000596842 TGM2P21980 687 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 RAP1GDS1P52306 607 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 SLC6A3Q01959 620 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 TEDDM1Q5T9Z0 273 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 ST13P4Q8IZP2 240 aaPredicted RBP15.67■□□□□ 0.1
UPF1-204ENST00000596842 TFB1MQ8WVM0 346 aaKnown RBP15.67■□□□□ 0.1
UPF1-204ENST00000596842 ZBED3Q96IU2 234 aaPredicted RBP15.67■□□□□ 0.1
UPF1-204ENST00000596842 NDNQ99608 321 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 DNAAF2Q9NVR5 837 aaKnown RBP15.67■□□□□ 0.1
UPF1-204ENST00000596842 ADAMTS6Q9UKP5 1117 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 INPP5FQ9Y2H2 1132 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 CAPN8A6NHC0 703 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 IL18RAPO95256 599 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 ITGA2BP08514 1039 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 ENO3P13929 434 aaPredicted RBP15.67■□□□□ 0.1
UPF1-204ENST00000596842 RBP5P82980 135 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 KIZQ2M2Z5 673 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 FRMD7Q6ZUT3 714 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 ILDR2Q71H61 639 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 DHDDSQ86SQ9 333 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 SPATA6LQ8N4H0 392 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 OR52K1Q8NGK4 314 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 RAB3IL1Q8TBN0 382 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 GATA6Q92908 595 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 SPATC1LQ9H0A9 340 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 S100A14Q9HCY8 104 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 SDR42E2A6NKP2 422 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 RNF103O00237 685 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 ADCY6O43306 1168 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 AMHP03971 560 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 NUMBP49757 651 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 IFRD2Q12894 506 aaPredicted RBP15.67■□□□□ 0.1
UPF1-204ENST00000596842 TAZQ16635 292 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 HSP90AA5PQ58FG0 334 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 ZNF534Q76KX8 674 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 C18orf25Q96B23 403 aaPredicted RBP15.67■□□□□ 0.1
UPF1-204ENST00000596842 ERLEC1Q96DZ1 483 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 AGAP2Q99490 1192 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 DTLQ9NZJ0 730 aa15.67■□□□□ 0.1
UPF1-204ENST00000596842 FAF1Q9UNN5 650 aaPredicted RBP15.67■□□□□ 0.1
UPF1-204ENST00000596842 MYOCOSA0A1B0GUC4 107 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 OR6B1O95007 311 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 PITX1P78337 314 aaPredicted RBP15.66■□□□□ 0.1
UPF1-204ENST00000596842 KCTD21Q4G0X4 260 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 PTAR1Q7Z6K3 402 aaPredicted RBP15.66■□□□□ 0.1
UPF1-204ENST00000596842 ZNF781Q8N8C0 355 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 KLF11O14901 512 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 PLIN3O60664 434 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 VAV1P15498 845 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 MAGEA10P43363 369 aaPredicted RBP15.66■□□□□ 0.1
UPF1-204ENST00000596842 IDH3AP50213 366 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 SERPINB9P50453 376 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 WASHC5Q12768 1159 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 SOWAHAQ2M3V2 549 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 DALRD3Q5D0E6 543 aaKnown RBP15.66■□□□□ 0.1
UPF1-204ENST00000596842 PLD6Q8N2A8 252 aaKnown RBP15.66■□□□□ 0.1
UPF1-204ENST00000596842 GALNT15Q8N3T1 639 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 CHST13Q8NET6 341 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 SGF29Q96ES7 293 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 CSPG4P5Q96PW8 444 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 KCTD15Q96SI1 283 aaPredicted RBP15.66■□□□□ 0.1
UPF1-204ENST00000596842 UBE2OQ9C0C9 1292 aaKnown RBP15.66■□□□□ 0.1
UPF1-204ENST00000596842 FZD8Q9H461 694 aa15.66■□□□□ 0.1
UPF1-204ENST00000596842 SNTG2Q9NY99 539 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms